RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 SLITRK5O94991 958 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 S1PR1P21453 382 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 GPC1P35052 558 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 SOX11P35716 441 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 CLNS1AP54105 237 aaKnown RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 SLC37A1P57057 533 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 MLF1P58340 268 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 PDCD4Q53EL6 469 aaKnown RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZNF628Q5EBL2 1059 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 SLC29A4Q7RTT9 530 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZNF551Q7Z340 670 aaPredicted RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 LGI4Q8N135 537 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 MIER2Q8N344 545 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZADH2Q8N4Q0 377 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZNF615Q8N8J6 731 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZNF675Q8TD23 568 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 STON2Q8WXE9 905 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ERP27Q96DN0 273 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 MARK4Q96L34 752 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZNF317Q96PQ6 595 aaPredicted RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 DUSP26Q9BV47 211 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 BHLHE41Q9C0J9 482 aaPredicted RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 LIN28AQ9H9Z2 209 aaKnown RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 ZBTB20Q9HC78 741 aaPredicted RBP14.4□□□□□ -0.1
DDB1-218ENST00000540784 SLAMF7Q9NQ25 335 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ABI3Q9P2A4 366 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 ITPR1Q14643 2758 aa14.4□□□□□ -0.1
DDB1-218ENST00000540784 MED13Q9UHV7 2174 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 E9PBE3 544 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 PLOD2O00469 737 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 FCHO1O14526 889 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 PRKNO60260 465 aaPredicted RBP14.39□□□□□ -0.11
DDB1-218ENST00000540784 PDGFAP04085 211 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 FRKP42685 505 aaPredicted RBP14.39□□□□□ -0.11
DDB1-218ENST00000540784 ARFIP2P53365 341 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 STX1BP61266 288 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 MRPS35P82673 323 aaKnown RBP14.39□□□□□ -0.11
DDB1-218ENST00000540784 HSPB3Q12988 150 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 EXOSC7Q15024 291 aaKnown RBP14.39□□□□□ -0.11
DDB1-218ENST00000540784 MLC1Q15049 377 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 HLA-DQA1Q5Y7H0 255 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 IGFL2Q6UWQ7 119 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 IGFL3Q6UXB1 125 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 CAMKMTQ7Z624 323 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 VPS37AQ8NEZ2 397 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 OR52R1Q8NGF1 315 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 OR5P2Q8WZ92 322 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 HAS2Q92819 552 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 TESCQ96BS2 214 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 ELP4Q96EB1 424 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 CHMP6Q96FZ7 201 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 NPAS2Q99743 824 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 SDR39U1Q9NRG7 319 aaPredicted RBP14.39□□□□□ -0.11
DDB1-218ENST00000540784 PLA2G3Q9NZ20 509 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 MYOTQ9UBF9 498 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 TRIM33Q9UPN9 1127 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 CFL2Q9Y281 166 aa14.39□□□□□ -0.11
DDB1-218ENST00000540784 YARS2Q9Y2Z4 477 aaKnown RBP14.39□□□□□ -0.11
DDB1-218ENST00000540784 A0A087WV62 115 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 C2orf92A0A1B0GVN3 265 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 DYTNA2CJ06 578 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 MAN1A2O60476 641 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 PLOD3O60568 738 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 DPM1O60762 260 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 CLPSP04118 112 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 NCF2P19878 526 aaPredicted RBP14.38□□□□□ -0.11
DDB1-218ENST00000540784 EFNA1P20827 205 aaPredicted RBP14.38□□□□□ -0.11
DDB1-218ENST00000540784 S100A3P33764 101 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 SOX18P35713 384 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 KIR3DL1P43629 444 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 ARG2P78540 354 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 SF3A3Q12874 501 aaKnown RBP eCLIP14.38□□□□□ -0.116e-6■□□□□ 10.9
DDB1-218ENST00000540784 DPY19L1Q2PZI1 675 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 ANXA8L1Q5VT79 327 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 METTL21CQ5VZV1 264 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 OR4F3Q6IEY1 312 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 TMEM107Q6UX40 140 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 C9orf40Q8IXQ3 194 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 BEST3Q8N1M1 668 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 ARMC10Q8N2F6 343 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 GLB1L3Q8NCI6 653 aaPredicted RBP14.38□□□□□ -0.11
DDB1-218ENST00000540784 OR7G2Q8NG99 324 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 OR8J2Q8NGG1 315 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 NUBPLQ8TB37 319 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 SLC39A7Q92504 469 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 MAGED4Q96JG8 741 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 TEX37Q96LM6 180 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 TMEM120AQ9BXJ8 343 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 CLMPQ9H6B4 373 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 C3orf14Q9HBI5 128 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 FAM53CQ9NYF3 392 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 ZIM2Q9NZV7 527 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 PRODH2Q9UF12 536 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 PCDHGB4Q9UN71 923 aa14.38□□□□□ -0.11
DDB1-218ENST00000540784 PRSS51A0A1B0GVH4 220 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 TMEM200CA6NKL6 621 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 WWP2O00308 870 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 CDK2AP1O14519 115 aa14.37□□□□□ -0.11
DDB1-218ENST00000540784 CFLARO15519 480 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms