RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 GLCCI1Q86VQ1 547 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 OR4F6Q8NGB9 312 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 NUDT8Q8WV74 236 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 EEF1AKMT1Q8WVE0 214 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 ZNF419Q96HQ0 510 aaPredicted RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 PELOQ9BRX2 385 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 TRPV4Q9HBA0 871 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 BEX1Q9HBH7 125 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 MMP17Q9ULZ9 603 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 RPL36Q9Y3U8 105 aaKnown RBP8.27□□□□□ -1.09
DDB1-217ENST00000540166 SIP14410 1827 aa8.27□□□□□ -1.09
DDB1-217ENST00000540166 GVINP1Q7Z2Y8 2422 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 LOC105369274A0A096LPK9 316 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SHISA7A6NL88 538 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 C4orf47A7E2U8 309 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 GFRA2O00451 464 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 WNT9AO14904 365 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SULT1B1O43704 296 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SSX5O60225 188 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 GPX5O75715 221 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 WDPCPO95876 746 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 APOC1P02654 83 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 S100A6P06703 90 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ENGP17813 658 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 FDXRP22570 491 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 TNFRSF4P43489 277 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 STC1P52823 247 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PLAG1Q6DJT9 500 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 KDELC1Q6UW63 502 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PHYKPLQ8IUZ5 450 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 LINC00518Q8N0U6 118 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 OR4N4Q8N0Y3 316 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SLC9A6Q92581 669 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ZNF382Q96SR6 550 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ZNF436Q9C0F3 470 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 DERL2Q9GZP9 239 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 NXF2Q9GZY0 626 aaKnown RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 NT5DC2Q9H857 520 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SLAMF7Q9NQ25 335 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 NUDT15Q9NV35 164 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 TMEM30AQ9NV96 361 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PTTG3PQ9NZH4 202 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 DNAJC27Q9NZQ0 273 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 CACNA1BQ00975 2339 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 WDR81Q562E7 1941 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 hCG_1807616A0A1W2PRN6 198 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 C5orf58C9J3I9 102 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PEPDP12955 493 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 OGNP20774 298 aaKnown RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 LPOP22079 712 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 ACVRL1P37023 503 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 FLI1Q01543 452 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 VMACQ2NL98 169 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 CLLU1Q5K131 121 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ADGRF1Q5T601 910 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ZNF776Q68DI1 518 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 ZNF613Q6PF04 617 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SYT13Q7L8C5 426 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 MEIOBQ8N635 442 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SLC5A8Q8N695 610 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 NLGN4YQ8NFZ3 816 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 OR6M1Q8NGM8 313 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 RHBDD1Q8TEB9 315 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PPP1R16AQ96I34 528 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 MCCC1Q96RQ3 725 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 SLC6A17Q9H1V8 727 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 IL21Q9HBE4 155 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ACTR10Q9NZ32 417 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 MGAT4BQ9UQ53 548 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PCDHGC4Q9Y5F7 938 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PCDHGA6Q9Y5G7 932 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 NUP214P35658 2090 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 CEP250Q9BV73 2442 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ZNF98A6NK75 572 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 IQCF5A8MTL0 148 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 MID1O15344 667 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 NBL1P41271 181 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 CAPZA2P47755 286 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SIM1P81133 766 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 ABRQ12979 859 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 MFSD13AQ14CX5 517 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 POM121L1PQ3SYA9 428 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 FAM160A2Q8N612 972 aaPredicted RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 ZNF366Q8N895 744 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 C7orf57Q8NEG2 295 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 OR2T11Q8NH01 316 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 RHBDF1Q96CC6 855 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 BTBD2Q9BX70 525 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 GSDMCQ9BYG8 508 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ATP13A1Q9HD20 1204 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 ENAMQ9NRM1 1142 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SDHAF2Q9NX18 166 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SLC39A1Q9NY26 324 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 VNN3Q9NY84 501 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PTGFRNQ9P2B2 879 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 FKBPLQ9UIM3 349 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 PCTPQ9UKL6 214 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 SLC6A14Q9UN76 642 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 COPS3Q9UNS2 423 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms