RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 ANKRD28O15084 1053 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 PDPK1O15530 556 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 AKAP10O43572 662 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 TGDSO95455 350 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 S1PR1P21453 382 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 NT5EP21589 574 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 NTSP30990 170 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 SSTR4P31391 388 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 RPL3P39023 403 aaKnown RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 FRKP42685 505 aaPredicted RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 RNF4P78317 190 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 MRPS35P82673 323 aaKnown RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 GUCY1A3Q02108 690 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 FUT7Q11130 342 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 MAP4K2Q12851 820 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 DUSP8Q13202 625 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF267Q14586 743 aaPredicted RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 EBPQ15125 230 aaKnown RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ACER2Q5QJU3 275 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 FHL5Q5TD97 284 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 C6orf163Q5TEZ5 329 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 EPGNQ6UW88 154 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 HSDL2Q6YN16 418 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 LINC00696Q6ZRV3 163 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 CAMKMTQ7Z624 323 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 CCDC116Q8IYX3 515 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 FAM9CQ8IZT9 166 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 BEST3Q8N1M1 668 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 VWA5B2Q8N398 1253 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 SLC5A8Q8N695 610 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 KRTCAP2Q8N6L1 136 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF615Q8N8J6 731 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 SIMC1Q8NDZ2 872 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ADCY4Q8NFM4 1077 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 OR9A2Q8NGT5 310 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 OR8K3Q8NH51 312 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 DOK4Q8TEW6 326 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 CIDECQ96AQ7 238 aaPredicted RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 PPCDCQ96CD2 204 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 CTHRC1Q96CG8 243 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 SENP5Q96HI0 755 aaPredicted RBP6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF354BQ96LW1 612 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 AMDHD1Q96NU7 426 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 OR52B2Q96RD2 323 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 EBF4Q9BQW3 602 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 CNPPD1Q9BV87 410 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 DEFB126Q9BYW3 111 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 BRINP2Q9C0B6 783 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 RNF32Q9H0A6 362 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 EPS8L2Q9H6S3 715 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 AIG1Q9NVV5 245 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ATP6V1HQ9UI12 483 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF639Q9UID6 485 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 TEKT2Q9UIF3 430 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 CSAG2Q9Y5P2 127 aa6.48□□□□□ -1.37
LPCAT3-209ENST00000540060 OR6C76A6NM76 312 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 GABRR3A8MPY1 467 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 DPM1O60762 260 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 PRAMEF2O60811 474 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 DIAPH2O60879 1101 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 ITGA10O75578 1167 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 C1QL1O75973 258 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 ZFAND5O76080 213 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 SLITRK5O94991 958 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 PSMG1O95456 288 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 WDPCPO95876 746 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 CBX7O95931 251 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 PRB1P04280 392 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 IFI6P09912 130 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 PCSK2P16519 638 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 PRPS1L1P21108 318 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 MPIP34949 423 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 MDH1P40925 334 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 MC3RP41968 323 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 IDH3AP50213 366 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 NCBP2P52298 156 aaKnown RBP eCLIP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 AQP5P55064 265 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 CLDN8P56748 225 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 MLF1P58340 268 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 HSPB3Q12988 150 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 EXOSC7Q15024 291 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 MEP1AQ16819 746 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 LSM12Q3MHD2 195 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 TRMT12Q53H54 448 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 ABHD17BQ5VST6 288 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 TMEM198Q66K66 360 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 SLC6A19Q695T7 634 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 NXNQ6DKJ4 435 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 CGB2Q6NT52 195 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 FAM111BQ6SJ93 734 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 RNF111Q6ZNA4 994 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 R3HCC1LQ7Z5L2 792 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 SPATA19Q7Z5L4 167 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 RPS19BP1Q86WX3 136 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 RBMXL3Q8N7X1 1067 aaKnown RBP6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 ZNF441Q8N8Z8 693 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 OR7G2Q8NG99 324 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 OR7G1Q8NGA0 311 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 OR7A2PQ8NGA2 310 aa6.47□□□□□ -1.37
LPCAT3-209ENST00000540060 CEP70Q8NHQ1 597 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms