RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 C22orf39Q6P5X5 142 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 WASH2PQ6VEQ5 465 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 QSOX2Q6ZRP7 698 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 DDX53Q86TM3 631 aaKnown RBP13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 LIX1LQ8IVB5 337 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 DNAJC5GQ8N7S2 189 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 RNFT2Q96EX2 444 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 CCDC120Q96HB5 630 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 TMEM169Q96HH4 297 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ATF6BQ99941 703 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 NLNQ9BYT8 704 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 MTG2Q9H4K7 406 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ZSCAN32Q9NX65 697 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 A4GNTQ9UNA3 340 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 CATP04040 527 aaKnown RBP13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 CLEC12AQ5QGZ9 265 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 FAM205BPQ63HN1 556 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 KIAA1841Q6NSI8 718 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ASB18Q6ZVZ8 466 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC37A3Q8NCC5 494 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 OR8H1Q8NGG4 311 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ANGPTL6Q8NI99 470 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 CXorf40BQ96DE9 158 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 KCNK12Q9HB15 430 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 ING3Q9NXR8 418 aa13.18□□□□□ -0.3
SCNN1A-215ENST00000540037 CD8B2A6NJW9 211 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 FAAHO00519 579 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC30A4O14863 429 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 FABP7O15540 132 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 HRO43593 1189 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 AKAP8O43823 692 aaKnown RBP13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 CH25HO95992 272 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 PAHP00439 452 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 CD8BP10966 210 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 PTNP21246 168 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 ENPP1P22413 925 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 CLDN20P56880 219 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 GPNMBQ14956 572 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 IL20RBQ6UXL0 311 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 KIF18BQ86Y91 864 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 DUSP18Q8NEJ0 188 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 MRPS31Q92665 395 aaKnown RBP13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 METTL2AQ96IZ6 378 aaKnown RBP13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 C19orf43Q9BQ61 176 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 SOSTQ9BQB4 213 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 TMEM43Q9BTV4 400 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 CFAP97Q9P2B7 532 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 HMGN4O00479 90 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 PDE9AO76083 593 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 LIMS3P0CW19 117 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 LIMS4P0CW20 117 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 NR2F6P10588 404 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 PRKAR1AP10644 381 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF30P17039 623 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 CRHR2Q13324 411 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 ASTLQ6HA08 431 aaPredicted RBP13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 ADGRF3Q8IZF5 1079 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 OR4F15Q8NGB8 312 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 OR4K5Q8NGD3 323 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 IL17FQ96PD4 163 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 SERHL2Q9H4I8 314 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 NIPAL2Q9H841 368 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 MYNNQ9NPC7 610 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 ATP13A2Q9NQ11 1180 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 SEC14L3Q9UDX4 400 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 LRFN2Q9ULH4 789 aa13.17□□□□□ -0.3
SCNN1A-215ENST00000540037 SYPP08247 313 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 CTSAP10619 480 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 UQCRC2P22695 453 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 EVX1P49640 407 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 TIGD3Q6B0B8 471 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF461Q8TAF7 563 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 FGF11Q92914 225 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 FUZQ9BT04 418 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 POLDIP3Q9BY77 421 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 PLAGL1Q9UM63 463 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 PPIL1Q9Y3C6 166 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 INMT-MINDY4F8WBC2 141 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF197O14709 1029 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 URODP06132 367 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 CKMP06732 381 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 TFPIP10646 304 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 CELP19835 753 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC6A11P48066 632 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 MANFP55145 182 aaKnown RBP13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 TOR2AQ5JU69 321 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 TMEM220Q6QAJ8 160 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 GLRX5Q86SX6 157 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 NR2C2APQ86WQ0 139 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 C9orf62Q8N4C0 152 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 TMEM163Q8TC26 289 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 UFD1Q92890 307 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 PHF21AQ96BD5 680 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 MARVELD1Q9BSK0 173 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 MAN2C1Q9NTJ4 1040 aa13.16□□□□□ -0.3
SCNN1A-215ENST00000540037 IL20RAQ9UHF4 553 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms