RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 ARHGEF39Q8N4T4 335 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 ATG16L2Q8NAA4 619 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 ADAMTS15Q8TE58 950 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 COL21A1Q96P44 957 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 ELF4Q99607 663 aaPredicted RBP16.12■□□□□ 0.17
LTBR-207ENST00000539925 DUSP23Q9BVJ7 150 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 PRDM6Q9NQX0 595 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 GIN1Q9NXP7 522 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 VNN3Q9NY84 501 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 LRIT1Q9P2V4 623 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 TMEFF2Q9UIK5 374 aaPredicted RBP16.12■□□□□ 0.17
LTBR-207ENST00000539925 BLOC1S6Q9UL45 172 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 SLC9A8Q9Y2E8 581 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 MAGED1Q9Y5V3 778 aaPredicted RBP16.12■□□□□ 0.17
LTBR-207ENST00000539925 LYVE1Q9Y5Y7 322 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 GON4LQ3T8J9 2241 aa16.12■□□□□ 0.17
LTBR-207ENST00000539925 LOC100130705A0A1B0GUX0 176 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 TRIM64A6NGJ6 449 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 WASHC1A8K0Z3 465 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 DUX1O43812 170 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 PLOD3O60568 738 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 PRAMEF10O60809 474 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 NSA2O95478 260 aaKnown RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 FESP07332 822 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 RYKP34925 604 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 HPCAP84074 193 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 SPIBQ01892 262 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 SIGLEC14Q08ET2 396 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 FAM214AQ32MH5 1076 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 LIN52Q52LA3 116 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 RBM48Q5RL73 367 aaKnown RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 CEP68Q76N32 757 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 KMT5CQ86Y97 462 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 PMM1Q92871 262 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 FBXL20Q96IG2 436 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 MAGED4Q96JG8 741 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 OR7D2Q96RA2 312 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 MBOAT4Q96T53 435 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 SOHLH2Q9NX45 425 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 C19orf53Q9UNZ5 99 aaPredicted RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 SH3GLB1Q9Y371 365 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 TDRD6O60522 2096 aaKnown RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 SPAG17Q6Q759 2223 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 KNL1Q8NG31 2342 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 A0A1B0GVT2 93 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 FITM1A5D6W6 292 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 SYT5O00445 386 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 CLDN4O14493 209 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 AK1P00568 194 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 PABPC4LP0CB38 370 aaKnown RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 SLC35E2P0CK97 266 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 AVPR1BP47901 424 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 MAN2A2P49641 1150 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 DUSP2Q05923 314 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 GRM7Q14831 915 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 MAPK11Q15759 364 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 ZNF750Q32MQ0 723 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 ZIK1Q3SY52 487 aaPredicted RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 MFSD12Q6NUT3 480 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 C16orf62Q7Z3J2 963 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 ZNF595Q8IYB9 648 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 HS3ST5Q8IZT8 346 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 SMYD1Q8NB12 490 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 APOBEC4Q8WW27 367 aaKnown RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 CSF3RQ99062 836 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 APOL4Q9BPW4 351 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 PINK1Q9BXM7 581 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 KRT84Q9NSB2 600 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 KCND3Q9UK17 655 aa16.11■□□□□ 0.17
LTBR-207ENST00000539925 MRPS2Q9Y399 296 aaKnown RBP16.11■□□□□ 0.17
LTBR-207ENST00000539925 LAMTOR5O43504 91 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 DIRAS1O95057 198 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 ALPPL2P10696 532 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 PRKACGP22612 351 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 SHC2P98077 582 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 SYPL1Q16563 259 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 DUSP7Q16829 419 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 MICAQ29983 383 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 GPAT3Q53EU6 434 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 ZNF628Q5EBL2 1059 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 COLEC12Q5KU26 742 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 PMS2CLQ68D20 193 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 TSEN54Q7Z6J9 526 aaKnown RBP16.1■□□□□ 0.17
LTBR-207ENST00000539925 RABEPKQ7Z6M1 372 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 ZNF605Q86T29 641 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 LINC00471Q8N535 108 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 OR5D16Q8NGK9 328 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 OR4C15Q8NGM1 316 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 PHF10Q8WUB8 498 aaKnown RBP16.1■□□□□ 0.17
LTBR-207ENST00000539925 GAB3Q8WWW8 586 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 NCSTNQ92542 709 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 HDAC2Q92769 488 aaKnown RBP16.1■□□□□ 0.17
LTBR-207ENST00000539925 COL26A1Q96A83 441 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 MUS81Q96NY9 551 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 TGM7Q96PF1 710 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 PELOQ9BRX2 385 aaKnown RBP16.1■□□□□ 0.17
LTBR-207ENST00000539925 AMBRA1Q9C0C7 1298 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 ZNF556Q9HAH1 456 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 UCKL1Q9NWZ5 548 aa16.1■□□□□ 0.17
LTBR-207ENST00000539925 SEMA5BQ9P283 1151 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms