RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 SLC5A12Q1EHB4 618 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 TMEM236Q5W0B7 351 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAMSTRQ6ZN01 415 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 PHF10Q8WUB8 498 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 EXOSC8Q96B26 276 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 BARD1Q99728 777 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 ANKMY1Q9P2S6 941 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 A8MU76 341 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 KCNK5O95279 499 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 PSMB9P28065 219 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 MAGEA2P43356 314 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 MASP1P48740 699 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 STXBP1P61764 594 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 LRRC74AQ0VAA2 488 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SELENBP1Q13228 472 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 DGCR6Q14129 220 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 LAPTM4AQ15012 233 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 WDR45BQ5MNZ6 344 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SYT6Q5T7P8 510 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 NDUFAF5Q5TEU4 345 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 LAIR1Q6GTX8 287 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 CCDC81Q6ZN84 652 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 PLEKHG7Q6ZR37 379 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SERPINA11Q86U17 422 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZDHHC21Q8IVQ6 265 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 BAHD1Q8TBE0 780 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 POP5Q969H6 163 aaKnown RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 TM4SF19Q96DZ7 209 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 IER2Q9BTL4 223 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 BTBD2Q9BX70 525 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 GABARAPL1Q9H0R8 117 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 TAS2R9Q9NYW1 312 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZNF282Q9UDV7 671 aaPredicted RBP16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 ACSL6Q9UKU0 697 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 ATG4BQ9Y4P1 393 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SNX11Q9Y5W9 270 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 SCN3AQ9NY46 2000 aa16.13■□□□□ 0.17
PCDHB17P-201ENST00000539533 DMDP11532 3685 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 A0A0J9YY10 115 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 A0A1B0GVT2 93 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 GLOD5A6NK44 160 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 FAM47E-STBD1D6RA91 191 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 NUDT7P0C024 238 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 FASLGP48023 281 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 CLK3P49761 638 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 NCS1P62166 190 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 OR5AK3PQ8NH89 298 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 TMEM121BQ9BXQ6 578 aaPredicted RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 GPATCH2Q9NW75 528 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 SCN3BQ9NY72 215 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 FBXW2Q9UKT8 454 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 ASB4Q9Y574 426 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 NOX1Q9Y5S8 564 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 VPS13AQ96RL7 3174 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 LMO7DNF2Z398 122 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 TPD52L2O43399 206 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 UBXN7O94888 489 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 MT-ND2P03891 347 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 EIF2S1P05198 315 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC35G6P0C7Q6 338 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZNF888P0CJ79 500 aaPredicted RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 ST13P50502 369 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 DAPP51397 102 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 CXCR4P61073 352 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 TRA2BP62995 288 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 BTN3A2P78410 334 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 IL1RL1Q01638 556 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 RGS1Q08116 209 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 KEAP1Q14145 624 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 MRM1Q6IN84 353 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 ANGPTL8Q6UXH0 198 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 CEP68Q76N32 757 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 PTOV1Q86YD1 416 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 SRFBP1Q8NEF9 429 aaKnown RBP16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 NT5CQ8TCD5 201 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZFYVE21Q9BQ24 234 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 SLC35A5Q9BS91 424 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 ASPSCR1Q9BZE9 553 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 KLK4Q9Y5K2 254 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 HSPE1-MOB4S4R3N1 261 aa16.12■□□□□ 0.17
PCDHB17P-201ENST00000539533 A0A1W2PR48 441 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 PIAS2O75928 621 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 FADS2O95864 444 aaKnown RBP16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 TCEA1P23193 301 aaKnown RBP16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 RGNQ15493 299 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 ARMC6Q6NXE6 501 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 ZZZ3Q8IYH5 903 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 UTP15Q8TED0 518 aaKnown RBP16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 RHNO1Q9BSD3 238 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 IL21RQ9HBE5 538 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 KLHL3Q9UH77 587 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 ABCG2Q9UNQ0 655 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 H0YGG7 62 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 HCRTR1O43613 425 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 NDUFB5O43674 189 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 TBX19O60806 448 aa16.11■□□□□ 0.17
PCDHB17P-201ENST00000539533 ST6GAL1P15907 406 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms