RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 IL4RP24394 825 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 PTGER3P43115 390 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 NPY2RP49146 381 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 YBEYP58557 167 aaPredicted RBP5.29□□□□□ -1.56
TRAV11-201ENST00000539512 ZFP36L1Q07352 338 aaKnown RBP5.29□□□□□ -1.56
TRAV11-201ENST00000539512 COX10Q12887 443 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 PDK1Q15118 436 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 CLPPQ16740 277 aaPredicted RBP5.29□□□□□ -1.56
TRAV11-201ENST00000539512 ANKRD55Q3KP44 614 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 HERC4Q5GLZ8 1057 aaPredicted RBP5.29□□□□□ -1.56
TRAV11-201ENST00000539512 WDR88Q6ZMY6 472 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 MOB2Q70IA6 237 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 LYG1Q8N1E2 194 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 CSNK1G2-AS1Q8NCQ2 148 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 ZNRF1Q8ND25 227 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 ANKRD9Q96BM1 317 aaPredicted RBP5.29□□□□□ -1.56
TRAV11-201ENST00000539512 DEFB118Q96PH6 123 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 CBWD1Q9BRT8 395 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 PLA2G4CQ9UP65 541 aa5.29□□□□□ -1.56
TRAV11-201ENST00000539512 A0A1W2PPR1 153 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 FOXI3A8MTJ6 420 aaPredicted RBP5.28□□□□□ -1.56
TRAV11-201ENST00000539512 E9PAM4 449 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 CYB561D2O14569 222 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 MT-ATP6P00846 226 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 MAGEA4P43358 317 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 NOP14P78316 857 aaKnown RBP5.28□□□□□ -1.56
TRAV11-201ENST00000539512 MYBPC1Q00872 1141 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 BNIP1Q12981 228 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 IL23RQ5VWK5 629 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 LEMD1Q68G75 181 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 RHBDD2Q6NTF9 364 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 OLFM4Q6UX06 510 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 KDM8Q8N371 416 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 OR52E1Q8NGJ3 308 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 TMEM45BQ96B21 275 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 CAPNS2Q96L46 248 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 ATG10Q9H0Y0 220 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 SIRPDQ9H106 197 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 FAM124BQ9H5Z6 455 aaPredicted RBP5.28□□□□□ -1.56
TRAV11-201ENST00000539512 BCAP29Q9UHQ4 241 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 ZNF175Q9Y473 711 aa5.28□□□□□ -1.56
TRAV11-201ENST00000539512 KRT87PA6NCN2 255 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 LRRTM2O43300 516 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 BUB1O43683 1085 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 HCKP08631 526 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 RALAP11233 206 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 HSPA1LP34931 641 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 OR6B2Q6IFH4 312 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 PLBD1Q6P4A8 553 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 CNSTQ6PJW8 725 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 MFSD7Q6UXD7 560 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 YRDCQ86U90 279 aaKnown RBP5.27□□□□□ -1.57
TRAV11-201ENST00000539512 RANBP3LQ86VV4 465 aaPredicted RBP5.27□□□□□ -1.57
TRAV11-201ENST00000539512 TMEM237Q96Q45 408 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 TSPAN18Q96SJ8 248 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 NLNQ9BYT8 704 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 LHX3Q9UBR4 397 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 EMCNQ9ULC0 261 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 CSAG2Q9Y5P2 127 aa5.27□□□□□ -1.57
TRAV11-201ENST00000539512 A0A0J9YVX5 310 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 A0A0U1RRA0 63 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 TMEM89A2RUT3 159 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 TRABD2BA6NFA1 517 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 GOT2P00505 430 aaKnown RBP5.26□□□□□ -1.57
TRAV11-201ENST00000539512 CXCL10P02778 98 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 SNRPCP09234 159 aaKnown RBP5.26□□□□□ -1.57
TRAV11-201ENST00000539512 UCP1P25874 307 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 ELK3P41970 407 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 MFAP2P55001 183 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 CYLC2Q14093 348 aaPredicted RBP5.26□□□□□ -1.57
TRAV11-201ENST00000539512 GAMTQ14353 236 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 ABRAXAS2Q15018 415 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 C14orf28Q4W4Y0 310 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 WDR25Q64LD2 544 aaPredicted RBP5.26□□□□□ -1.57
TRAV11-201ENST00000539512 NEK5Q6P3R8 708 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 DPY19L2P2Q6ZN68 376 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 GPBP1Q86WP2 473 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 HDDC3Q8N4P3 179 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 OR8H1Q8NGG4 311 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 BIRC7Q96CA5 298 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 ACCSQ96QU6 501 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 PYGO2Q9BRQ0 406 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 TMEM231Q9H6L2 316 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 NRN1Q9NPD7 142 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 IKZF3Q9UKT9 509 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 FKBP7Q9Y680 259 aa5.26□□□□□ -1.57
TRAV11-201ENST00000539512 NPIPA5A0A0B4J1W7 369 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 NPIPA5E9PKD4 350 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 SEC22BO75396 215 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 SEMA4FO95754 770 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 RENP00797 406 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 CCDC159P0C7I6 412 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 GAP43P17677 238 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 IL10P22301 178 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 PCK2Q16822 640 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 AGKQ53H12 422 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 TOR1AIP1Q5JTV8 583 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 ACER2Q5QJU3 275 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 CENPSQ8N2Z9 138 aa5.25□□□□□ -1.57
TRAV11-201ENST00000539512 TBCKQ8TEA7 893 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms