RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 WBP11Q9Y2W2 641 aaKnown RBP13.27□□□□□ -0.28
ACTN1-205ENST00000538545 IGHV5-51A0A0C4DH38 117 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 OR5K4A6NMS3 321 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 PTGES3LE9PB15 166 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 ZIC2O95409 532 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-205ENST00000538545 EPPINO95925 133 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 CD247P20963 164 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 FMO3P31513 532 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 MPIP34949 423 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 BUD31P41223 144 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-205ENST00000538545 IL5RAQ01344 420 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 NEDD8Q15843 81 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 USP53Q70EK8 1073 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 CCDC71Q8IV32 467 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-205ENST00000538545 C8orf59Q8N0T1 100 aaPredicted RBP13.27□□□□□ -0.29
ACTN1-205ENST00000538545 ZNF555Q8NEP9 628 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 KRT84Q9NSB2 600 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 IRAK4Q9NWZ3 460 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 TMEM9Q9P0T7 183 aa13.27□□□□□ -0.29
ACTN1-205ENST00000538545 PRKNO60260 465 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ARHGDIAP52565 204 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 PIN1Q13526 163 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 EXOSC7Q15024 291 aaKnown RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ZC3H14Q6PJT7 736 aaKnown RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 CCDC80Q76M96 950 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 PIWIL3Q7Z3Z3 882 aaKnown RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ARMC8Q8IUR7 673 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 C19orf47Q8N9M1 422 aaKnown RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 PIK3C3Q8NEB9 887 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 BPIFB6Q8NFQ5 453 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 SHDQ96IW2 340 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 OR7D2Q96RA2 312 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 SERINC2Q96SA4 455 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 A4GALTQ9NPC4 353 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ADAP2Q9NPF8 381 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 DDX18Q9NVP1 670 aaKnown RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 MKLN1Q9UL63 735 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 TRBV4-1A0A0J9YWV2 114 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 CENPVL1A0A0U1RR11 272 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 H0YAE9 185 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 BCKDKO14874 412 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 MAN1A2O60476 641 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 JRKO75564 520 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 CT62P0C5K7 136 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 CHRNEQ04844 493 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 TGM3Q08188 693 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 KLHL17Q6TDP4 642 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 RNF44Q7L0R7 432 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 THAP5Q7Z6K1 395 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 LGI4Q8N135 537 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 Q8N9G6 341 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 TTC29Q8NA56 475 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 CHDHQ8NE62 594 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 NECAB3Q96P71 396 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 RAD21L1Q9H4I0 556 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ACER3Q9NUN7 267 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ENTPD2Q9Y5L3 495 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 SLC22A7Q9Y694 548 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 TECTAO75443 2155 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GPR179Q6PRD1 2367 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 NPIPA5A0A0B4J1W7 369 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ENO4A6NNW6 628 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 A8MU76 341 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 NPIPA7E9PJI5 369 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 TOR1BO14657 336 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 VILLO15195 856 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GUCY1B2O75343 617 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 HPRP00739 348 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 PROS1P07225 676 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 IGFBP1P08833 259 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 PABPC4LP0CB38 370 aaKnown RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 NPIPA8P0DM63 369 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 PPP2R1BP30154 601 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 OR1D5P58170 312 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 NXPH1P58417 271 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ISL1P61371 349 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 ABHD13Q7L211 337 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 VRK2Q86Y07 508 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GATAD2AQ86YP4 633 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 OR4K14Q8NGD5 310 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GIMAP5Q96F15 307 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 P2RX2Q9UBL9 471 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 NTNG1Q9Y2I2 539 aa13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GPR55Q9Y2T6 319 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 TMEM184BQ9Y519 407 aaPredicted RBP13.26□□□□□ -0.29
ACTN1-205ENST00000538545 GSTM2P28161 218 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 XCR1P46094 333 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 RFX3P48380 749 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 FNTBP49356 437 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 MLC1Q15049 377 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 FGD3Q5JSP0 725 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 TMEM236Q5W0B7 351 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 TCTN3Q6NUS6 607 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 MCATQ8IVS2 390 aaKnown RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 LRRC25Q8N386 305 aaPredicted RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 OR10G2Q8NGC3 310 aa13.25□□□□□ -0.29
ACTN1-205ENST00000538545 APOBEC4Q8WW27 367 aaKnown RBP13.25□□□□□ -0.29
ACTN1-205ENST00000538545 GEMIN6Q8WXD5 167 aaKnown RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms