RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 PRSS3P35030 304 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 LSSP48449 732 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 C14orf28Q4W4Y0 310 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 ELP2Q6IA86 826 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 Q6ZNX1 250 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 VTCN1Q7Z7D3 282 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 OR6N2Q8NGY6 317 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 HOXB13Q92826 284 aaPredicted RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 FOXRED1Q96CU9 486 aaPredicted RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 TGM7Q96PF1 710 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 NPY6RQ99463 290 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 IL12RB2Q99665 862 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 MINDY3Q9H8M7 445 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 WDR6Q9NNW5 1121 aaKnown RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 OR2S2Q9NQN1 319 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 BTNL2Q9UIR0 455 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 A0A1B0GVT2 93 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 JUNP05412 331 aaKnown RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 SLC35E2BP0CK96 405 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 NUDT1P36639 197 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 DDOSTP39656 456 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 RAB8AP61006 207 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 GRB7Q14451 532 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 ADGRF1Q5T601 910 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 CPZQ66K79 652 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 RGL4Q8IZJ4 473 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 ESX1Q8N693 406 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 OR7G3Q8NG95 312 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 OR2AP1Q8NGE2 309 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 ZNF417Q8TAU3 575 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.62□□□□□ -1.354e-7■■■■■ 31.1
SORT1-209ENST00000538502 BORCS7Q96B45 105 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 SLC19A3Q9BZV2 496 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 VNN3Q9NY84 501 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 SARDHQ9UL12 918 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 ZNF705FA8MVS1 300 aaPredicted RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 ALDOBP05062 364 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 PRKCGP05129 697 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 ZNF705DP0CH99 300 aaPredicted RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 ZNF705BP0CI00 300 aaPredicted RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 FKBP1BP68106 108 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 GAREM2Q75VX8 874 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 LYSMD3Q7Z3D4 306 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 LAS2Q8IYD9 372 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 TMEM151AQ8N4L1 468 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 BRIX1Q8TDN6 353 aaKnown RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 BORCS8Q96FH0 119 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 BRF2Q9HAW0 419 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 CRTAC1Q9NQ79 661 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 PRMT8Q9NR22 394 aaPredicted RBP6.62□□□□□ -1.35
SORT1-209ENST00000538502 B3GNT2Q9NY97 397 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 HS3ST4Q9Y661 456 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 ENPP4Q9Y6X5 453 aa6.62□□□□□ -1.35
SORT1-209ENST00000538502 MYOCOSA0A1B0GUC4 107 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 C1orf226A1L170 272 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 OR6C6A6NF89 314 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ARPC5O15511 151 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SRPX2O60687 465 aaPredicted RBP6.61□□□□□ -1.35
SORT1-209ENST00000538502 AMY2AP04746 511 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 RAB40ALP0C0E4 278 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 MAGEA3P43357 314 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 IDH3GP51553 393 aaPredicted RBP6.61□□□□□ -1.35
SORT1-209ENST00000538502 OR4D2P58180 307 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ERVK-21P61565 698 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 POU4F3Q15319 338 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 AVPI1Q5T686 147 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SLC18B1Q6NT16 456 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 FUT10Q6P4F1 479 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ENPP6Q6UWR7 440 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SLC9B2Q86UD5 537 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 C3orf58Q8NDZ4 430 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ZFP90Q8TF47 636 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 RAB40AQ8WXH6 277 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 CLEC4DQ8WXI8 215 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 TXN2Q99757 166 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 TRMT61BQ9BVS5 477 aaKnown RBP6.61□□□□□ -1.35
SORT1-209ENST00000538502 GPR88Q9GZN0 384 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SLC25A31Q9H0C2 315 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 RIMS3Q9UJD0 308 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 MYH8P13535 1937 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ARNTLO00327 626 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 CXCL14O95715 111 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 GJB1P08034 283 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 LMO2P25791 158 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 DIO3P55073 304 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ACTBL2Q562R1 376 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SHFQ7M4L6 423 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 CLEC4CQ8WTT0 213 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SGTBQ96EQ0 304 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 CDCA5Q96FF9 252 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 ZNF587Q96SQ5 575 aaPredicted RBP6.61□□□□□ -1.35
SORT1-209ENST00000538502 PSD2Q9BQI7 771 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 TMEM175Q9BSA9 504 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 DHRS4Q9BTZ2 278 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 DUS2Q9NX74 493 aaKnown RBP6.61□□□□□ -1.35
SORT1-209ENST00000538502 RPH3AQ9Y2J0 694 aaPredicted RBP6.61□□□□□ -1.35
SORT1-209ENST00000538502 SLC6A5Q9Y345 797 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SLC43A1O75387 559 aa6.61□□□□□ -1.35
SORT1-209ENST00000538502 SPDEFO95238 335 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms