RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 Q6ZNX1 250 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 LINC00299Q6ZSB3 139 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 SLCO6A1Q86UG4 719 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 TRIM69Q86WT6 500 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 KRT73Q86Y46 540 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 KCT2Q8NC54 265 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 RPL3LQ92901 407 aaKnown RBP13.21□□□□□ -0.3
LIMK1-208ENST00000538333 SLC38A4Q969I6 547 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 TSACCQ96A04 125 aaPredicted RBP13.21□□□□□ -0.3
LIMK1-208ENST00000538333 VMP1Q96GC9 406 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 FCRL4Q96PJ5 515 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 BTBD2Q9BX70 525 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 ALOXE3Q9BYJ1 711 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 UCK2Q9BZX2 261 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 TMEM168Q9H0V1 697 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 MS4A12Q9NXJ0 267 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.21□□□□□ -0.3
LIMK1-208ENST00000538333 ENTPD4Q9Y227 616 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 PMF1-BGLAPU3KQ54 211 aa13.21□□□□□ -0.3
LIMK1-208ENST00000538333 hCG_2014768A0A024R1R8 64 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 SH3D21A4FU49 640 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 J3QRK9 145 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 M0R3H8 397 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 APBB3O95704 486 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 CSNK2A2P19784 350 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-208ENST00000538333 RPS15AP62244 130 aaKnown RBP13.2□□□□□ -0.3
LIMK1-208ENST00000538333 ST3GAL4Q11206 333 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 PGBD2Q6P3X8 592 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 BHLHB9Q6PI77 547 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 TMEM107Q6UX40 140 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 FAM92BQ6ZTR7 304 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 RD3Q7Z3Z2 195 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 OR56A1Q8NGH5 318 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 GAL3ST3Q96A11 431 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 MOAP1Q96BY2 351 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 LGALS12Q96DT0 336 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 SH3YL1Q96HL8 342 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-208ENST00000538333 YIPF4Q9BSR8 244 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 GALNT8Q9NY28 637 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 A0A1W2PRQ8 180 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 M0R3G1 203 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 MPZL2O60487 215 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 LGI1O95970 557 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 ADRA2AP08913 450 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 ADORA3P0DMS8 318 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 NDUFV2P19404 249 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 HNRNPA2B1P22626 353 aaKnown RBP13.2□□□□□ -0.3
LIMK1-208ENST00000538333 ACTR1BP42025 376 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 MAN2A2P49641 1150 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 DGKEP52429 567 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 ACTR1AP61163 376 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 PIN1Q13526 163 aaPredicted RBP13.2□□□□□ -0.3
LIMK1-208ENST00000538333 SYT16Q17RD7 645 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 TMEM92Q6UXU6 159 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 DGLUCYQ7Z3D6 616 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 NT5CQ8TCD5 201 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 C16orf58Q96GQ5 468 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 C10orf90Q96M02 699 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 AKIP1Q9NQ31 210 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 MAN2C1Q9NTJ4 1040 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 LYARQ9NX58 379 aaKnown RBP13.2□□□□□ -0.3
LIMK1-208ENST00000538333 KCNE3Q9Y6H6 103 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 PIAS3Q9Y6X2 628 aa13.2□□□□□ -0.3
LIMK1-208ENST00000538333 TNFRSF10CO14798 259 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 MAGEB3O15480 346 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 ZW10O43264 779 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 OR10H3O60404 316 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 SLITRK5O94991 958 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 TP53P04637 393 aaPredicted RBP13.19□□□□□ -0.3
LIMK1-208ENST00000538333 DRD1P21728 446 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 MPIP34949 423 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 IDUAP35475 653 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 LTBRP36941 435 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 MC3RP41968 323 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 SLC15A1P46059 708 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 ANXA11P50995 505 aaKnown RBP13.19□□□□□ -0.3
LIMK1-208ENST00000538333 SMIM11AP58511 58 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 BTN3A2P78410 334 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 MRPS21P82921 87 aaKnown RBP13.19□□□□□ -0.3
LIMK1-208ENST00000538333 TFF2Q03403 129 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 TIGD6Q17RP2 521 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 PRAMEF8Q5VWM4 474 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 PRAMEF7Q5VXH5 474 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 SLX4IPQ5VYV7 408 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 FBXO42Q6P3S6 717 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 PTCHD4Q6ZW05 846 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 FAM46DQ8NEK8 389 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 OR9A2Q8NGT5 310 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 ZNF675Q8TD23 568 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 ELP4Q96EB1 424 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 SPATA5L1Q9BVQ7 753 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 SRMSQ9H3Y6 488 aa13.19□□□□□ -0.3
LIMK1-208ENST00000538333 CNOT2Q9NZN8 540 aaKnown RBP13.19□□□□□ -0.3
LIMK1-208ENST00000538333 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 A0A0G2JPF8 293 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 HNRNPCL2B2RXH8 293 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 HNRNPCL3B7ZW38 293 aa13.18□□□□□ -0.3
LIMK1-208ENST00000538333 EMC8O43402 210 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms