RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 SSR2P43308 183 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 PCYT1AP49585 367 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 HNMTP50135 292 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 NRG3P56975 720 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 SLAMF1Q13291 335 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 BIKQ13323 160 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 AP5B1Q2VPB7 878 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 OR2A2Q6IF42 318 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 FRA10AC1Q70Z53 315 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 CHMP1BQ7LBR1 199 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 IFNEQ86WN2 208 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 ST13P4Q8IZP2 240 aaPredicted RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 AGGF1Q8N302 714 aaeCLIP10.09□□□□□ -0.791e-6■■■■□ 20.3
CLPB-208ENST00000538021 RNF214Q8ND24 703 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 GTPBP3Q969Y2 492 aaKnown RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 TP53INP1Q96A56 240 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 BEX2Q9BXY8 128 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 PITHD1Q9GZP4 211 aaPredicted RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 XAB2Q9HCS7 855 aaKnown RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 WWOXQ9NZC7 414 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 ZNF490Q9ULM2 529 aaPredicted RBP10.09□□□□□ -0.79
CLPB-208ENST00000538021 VWA7Q9Y334 891 aa10.09□□□□□ -0.79
CLPB-208ENST00000538021 LRRC14BA6NHZ5 514 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 NCF1BA6NI72 391 aaPredicted RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 NCF1CA8MVU1 366 aaPredicted RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 HS3ST1O14792 307 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 CDH16O75309 829 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 CLPSP04118 112 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 CRHP06850 196 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 CCDC175P0C221 793 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 NCF1P14598 390 aaPredicted RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 TCEA1P23193 301 aaKnown RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 TLX1P31314 330 aaPredicted RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 SSTR4P31391 388 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 MAGEA6P43360 314 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 SLC6A12P48065 614 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 LHX2P50458 406 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 RPS13P62277 151 aaKnown RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 FUT7Q11130 342 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 EXOC3L2Q2M3D2 409 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 SPRED3Q2MJR0 410 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 C18orf63Q68DL7 685 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 AAGABQ6PD74 315 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 ZNF610Q8N9Z0 462 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 AKAP1Q92667 903 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLPB-208ENST00000538021 TANKQ92844 425 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 CTHRC1Q96CG8 243 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 PLPPR2Q96GM1 343 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 ZNF845Q96IR2 970 aaPredicted RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 VPS39Q96JC1 886 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 PELOQ9BRX2 385 aaKnown RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 SORBS1Q9BX66 1292 aaKnown RBP10.08□□□□□ -0.8
CLPB-208ENST00000538021 CAPS2Q9BXY5 557 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 PHACTR1Q9C0D0 580 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 ACTR8Q9H981 624 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 LRTM1Q9HBL6 345 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 GALNT9Q9HCQ5 603 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 TAS2R10Q9NYW0 307 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 SLC17A6Q9P2U8 582 aa10.08□□□□□ -0.8
CLPB-208ENST00000538021 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.08□□□□□ -0.8
CLPB-208ENST00000538021 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.07□□□□□ -0.8
CLPB-208ENST00000538021 SLC22A20A6NK97 555 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 KLF4O43474 513 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 GPRIN2O60269 458 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 ADAM11O75078 769 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 CBR3O75828 277 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 TGFB1P01137 390 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 THBDP07204 575 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 TBXA2RP21731 343 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 CDKN1AP38936 164 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 KIR2DL2P43627 348 aaPredicted RBP10.07□□□□□ -0.8
CLPB-208ENST00000538021 CDKL1Q00532 357 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 DOC2AQ14183 400 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 C6orf52Q5T4I8 152 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 DESI1Q6ICB0 168 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 FAM45BPQ6NSW5 357 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 SLC30A6Q6NXT4 461 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 GPR180Q86V85 440 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 SNX31Q8N9S9 440 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 MCUQ8NE86 351 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 FAM45AQ8TCE6 357 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 ANKRD7Q92527 254 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 CAVIN3Q969G5 261 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 RHBDF1Q96CC6 855 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 REPS1Q96D71 796 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 PTCD3Q96EY7 689 aaKnown RBP10.07□□□□□ -0.8
CLPB-208ENST00000538021 PDLIM5Q96HC4 596 aaKnown RBP10.07□□□□□ -0.8
CLPB-208ENST00000538021 SIGLEC10Q96LC7 697 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 SFXN2Q96NB2 322 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 KCNK17Q96T54 332 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 OSBPL11Q9BXB4 747 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 MS4A8Q9BY19 250 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 OR2B2Q9GZK3 357 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 SLCO5A1Q9H2Y9 848 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 MS4A12Q9NXJ0 267 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 GPRC5BQ9NZH0 403 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 KLRF1Q9NZS2 232 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 HEY2Q9UBP5 337 aa10.07□□□□□ -0.8
CLPB-208ENST00000538021 PTBP2Q9UKA9 531 aaKnown RBP10.07□□□□□ -0.8
CLPB-208ENST00000538021 RNF112Q9ULX5 631 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms