RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SMIM10Q96HG1 83 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 DGAT2Q96PD7 388 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 CACNG6Q9BXT2 260 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 COPS7BQ9H9Q2 264 aaPredicted RBP8.26□□□□□ -1.09
USP28-205ENST00000537706 TEX10Q9NXF1 929 aaPredicted RBP8.26□□□□□ -1.09
USP28-205ENST00000537706 CISD1Q9NZ45 108 aaKnown RBP8.26□□□□□ -1.09
USP28-205ENST00000537706 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.26□□□□□ -1.09
USP28-205ENST00000537706 EMC9Q9Y3B6 208 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 SPACA6W5XKT8 324 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 DOCK7Q96N67 2140 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 EML6Q6ZMW3 1958 aa8.26□□□□□ -1.09
USP28-205ENST00000537706 MGAM2Q2M2H8 2515 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 LINC01387J3KSC0 135 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 CDC7O00311 574 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PDLIM4P50479 330 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 NRG3P56975 720 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 RUNX2Q13950 521 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 CSHL1Q14406 222 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 RBBP5Q15291 538 aaKnown RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 CYP1B1Q16678 543 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 IQCCQ4KMZ1 466 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 GLE1Q53GS7 698 aaKnown RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 HLA-DQA1Q5Y7H0 255 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 SBSNQ6UWP8 590 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 ANGPTL8Q6UXH0 198 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 BEND4Q6ZU67 534 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 HDXQ7Z353 690 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 STK32CQ86UX6 486 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 RHOT2Q8IXI1 618 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 C9orf40Q8IXQ3 194 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PRELID2Q8N945 189 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 OR52K1Q8NGK4 314 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PYCR2Q96C36 320 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PBKQ96KB5 322 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 SFXN2Q96NB2 322 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 AIF1LQ9BQI0 150 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 METTL7AQ9H8H3 244 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 SNX15Q9NRS6 342 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 MARCH4Q9P2E8 410 aaPredicted RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 WBP11Q9Y2W2 641 aaKnown RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 MYOCOSA0A1B0GUC4 107 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 NDUFS8O00217 210 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 CBR3O75828 277 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 RPL22P35268 128 aaKnown RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 GABPB1Q06547 395 aaPredicted RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 BIKQ13323 160 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 GLIPR1L2Q4G1C9 344 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 FBLN7Q53RD9 439 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 C11orf63Q6NUN7 778 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 C8orf74Q6P047 294 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 AGTRAPQ6RW13 159 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PEX26Q7Z412 305 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PEG10Q86TG7 708 aaKnown RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 OR4K1Q8NGD4 311 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 SLC35G2Q8TBE7 412 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 KCTD4Q8WVF5 259 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 MRPL24Q96A35 216 aaKnown RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 CTHRC1Q96CG8 243 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 SENP5Q96HI0 755 aaPredicted RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 BTBD9Q96Q07 612 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 OR2B2Q9GZK3 357 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 CCDC68Q9H2F9 335 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 KLHL42Q9P2K6 505 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 PACSIN2Q9UNF0 486 aaPredicted RBP8.25□□□□□ -1.09
USP28-205ENST00000537706 SH2B3Q9UQQ2 575 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 TCAF1Q9Y4C2 921 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 CLDN16Q9Y5I7 305 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 MAD1L1Q9Y6D9 718 aa8.25□□□□□ -1.09
USP28-205ENST00000537706 FREM1Q5H8C1 2179 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HEATR5BQ9P2D3 2071 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 OR6C76A6NM76 312 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 ERI2A8K979 691 aaKnown RBP8.24□□□□□ -1.09
USP28-205ENST00000537706 ETHE1O95571 254 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 CD8AP01732 235 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HIST1H2AGP0C0S8 130 aaPredicted RBP8.24□□□□□ -1.09
USP28-205ENST00000537706 FCGR2AP12318 317 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HIST1H2ADP20671 130 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 CDH11P55287 796 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 IRX1P78414 480 aaPredicted RBP8.24□□□□□ -1.09
USP28-205ENST00000537706 TGM3Q08188 693 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 LGALS3BPQ08380 585 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 FOXL1Q12952 345 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 BCL2A1Q16548 175 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 UGT2A3Q6UWM9 527 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 STAC2Q6ZMT1 411 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 RNF111Q6ZNA4 994 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 FAM214BQ7L5A3 538 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 SNX31Q8N9S9 440 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 TMEM52Q8NDY8 209 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 NUP43Q8NFH3 380 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 KBTBD8Q8NFY9 601 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 ACTL9Q8TC94 416 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 ACTRT1Q8TDG2 376 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 NEUROG1Q92886 237 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 C3orf49Q96BT1 292 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 RBM18Q96H35 190 aaKnown RBP8.24□□□□□ -1.09
USP28-205ENST00000537706 HES6Q96HZ4 224 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HIST1H2AHQ96KK5 128 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 TCF12Q99081 682 aa8.24□□□□□ -1.09
USP28-205ENST00000537706 HIST1H2AJQ99878 128 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms