RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 USP3Q9Y6I4 520 aa5.16□□□□□ -1.58
PTPRD-213ENST00000537002 F5H0A9 414 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 SIGLEC6O43699 453 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 RHOQP17081 205 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 ARNTP27540 789 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 GKP32189 559 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 PIGAP37287 484 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 ADCYAP1R1P41586 468 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 HTR6P50406 440 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 MLLT1Q03111 559 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 IRF3Q14653 427 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 GINS1Q14691 196 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TAF1AQ15573 450 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 VARS2Q5ST30 1063 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 NXNL2Q5VZ03 156 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 SAXO2Q658L1 398 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM107Q6UX40 140 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM130Q8N3G9 435 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 CASTOR1Q8WTX7 329 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 BCL7CQ8WUZ0 217 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 NR4A3Q92570 626 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 S100A13Q99584 98 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 YIPF4Q9BSR8 244 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 QRSL1Q9H0R6 528 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 NSUN3Q9H649 340 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 OSER1Q9NX31 292 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 LOC285095A0A1B0GVY8 99 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 PCDH7O60245 1069 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 PIP5K1CO60331 668 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TBL1XO60907 577 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 GRK5P34947 590 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 RAP2BP61225 183 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TAS1R3Q7RTX0 852 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 PRICKLE2Q7Z3G6 844 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 LAX1Q8IWV1 398 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 OR7D4Q8NG98 312 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 OR8J1Q8NGP2 316 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 SETD7Q8WTS6 366 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 FEVQ99581 238 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 RUVBL1Q9Y265 456 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 A0A1W2PRB8 838 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 UPK3BL1B0FP48 263 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 C1orf196B1AJZ1 125 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 UPK3BL2E5RIL1 263 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 UBFD1O14562 309 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 DSCR3O14972 297 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 NUDT14O95848 222 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 CKMP06732 381 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 MRPL3P09001 348 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 HOXD4P09016 255 aaPredicted RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 ACADLP28330 430 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 EIF2S3P41091 472 aaKnown RBP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 PTGER3P43115 390 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 DNASE1L1P49184 302 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 VEGFBP49765 207 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 SMSP52788 366 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 RAB2AP61019 212 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 ADAM8P78325 824 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 HYAL2Q12891 473 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 BIKQ13323 160 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TOMM20Q15388 145 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 SSX2Q16385 188 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 ZNF311Q5JNZ3 666 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 MED27Q6P2C8 311 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 MTFR2Q6P444 385 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 TMEM185AQ8NFB2 350 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.15□□□□□ -1.58
PTPRD-213ENST00000537002 RNF31Q96EP0 1072 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 SPATC1LQ9H0A9 340 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 OSBPL2Q9H1P3 480 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 NDUFB11Q9NX14 153 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 NRCAMQ92823 1304 aa5.15□□□□□ -1.58
PTPRD-213ENST00000537002 HRGP04196 525 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 FAM189BP81408 668 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 MGAT3Q09327 533 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 GRB14Q14449 540 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 RHEBQ15382 184 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 LBHQ53QV2 105 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-213ENST00000537002 C9orf64Q5T6V5 341 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 FBXO42Q6P3S6 717 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 TBPL2Q6SJ96 375 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 ALKAL2Q6UX46 152 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF704Q6ZNC4 412 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-213ENST00000537002 GJD3Q8N144 294 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 OR51G2Q8NGK0 314 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 SLC35F5Q8WV83 523 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 KCTD13Q8WZ19 329 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 PGAP3Q96FM1 320 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-213ENST00000537002 PIP5K1AQ99755 562 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 ZNF251Q9BRH9 671 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 LGR4Q9BXB1 951 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 ALOXE3Q9BYJ1 711 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 TLR9Q9NR96 1032 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 TEX10Q9NXF1 929 aaPredicted RBP5.15□□□□□ -1.59
PTPRD-213ENST00000537002 FARSAQ9Y285 508 aaKnown RBP5.15□□□□□ -1.59
PTPRD-213ENST00000537002 OR2AG2A6NM03 316 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 SULT1C2O00338 296 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 PRODHO43272 600 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 FMO6PO60774 539 aa5.15□□□□□ -1.59
PTPRD-213ENST00000537002 RGS11O94810 467 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms