RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 FBXO7Q9Y3I1 522 aa4.47□□□□□ -1.69
PRKDC-208ENST00000536710 RAD54L2Q9Y4B4 1467 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 FAM230AA0A1W2PPH8 454 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 K7EPI3 171 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 SOCS3O14543 225 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 EI24O14681 340 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 BUB1O43683 1085 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 DIRAS3O95661 229 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 HEXBP07686 556 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 RRASP10301 218 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 NCF1P14598 390 aaPredicted RBP4.46□□□□□ -1.7
PRKDC-208ENST00000536710 GP9P14770 177 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 SCGB2A2Q13296 93 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 ZKSCAN8Q15776 578 aaPredicted RBP4.46□□□□□ -1.7
PRKDC-208ENST00000536710 CEP85LQ5SZL2 805 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 NUFIP2Q7Z417 695 aaKnown RBP4.46□□□□□ -1.7
PRKDC-208ENST00000536710 TEX9Q8N6V9 391 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 ZNF397Q8NF99 534 aaPredicted RBP4.46□□□□□ -1.7
PRKDC-208ENST00000536710 OR1B1Q8NGR6 318 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 LRRC15Q8TF66 581 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 NPRL2Q8WTW4 380 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 NCLNQ969V3 563 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 CAPNS2Q96L46 248 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 KRTAP17-1Q9BYP8 105 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 Q9HAA7 133 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 NRN1Q9NPD7 142 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 GDAP2Q9NXN4 497 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 SEC14L4Q9UDX3 406 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 SH3BGRL2Q9UJC5 107 aa4.46□□□□□ -1.7
PRKDC-208ENST00000536710 ZNF346Q9UL40 294 aaKnown RBP4.46□□□□□ -1.7
PRKDC-208ENST00000536710 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 A0A0J9YVX5 310 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 ANKRD30BLA7E2S9 258 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 H7C423 109 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 TOM1L1O75674 476 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 SORBS2O94875 1100 aaKnown RBP4.45□□□□□ -1.7
PRKDC-208ENST00000536710 AK1P00568 194 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 RNF224P0DH78 156 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 PAICSP22234 425 aaKnown RBP4.45□□□□□ -1.7
PRKDC-208ENST00000536710 PTPN4P29074 926 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 ATP4BP51164 291 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 SGSHP51688 502 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 SLC7A2P52569 658 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 SRYQ05066 204 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 RFTN1Q14699 578 aaPredicted RBP4.45□□□□□ -1.7
PRKDC-208ENST00000536710 DOK6Q6PKX4 331 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 AFTPHQ6ULP2 937 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 ARSKQ6UWY0 536 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 P4HA3Q7Z4N8 544 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 CERS5Q8N5B7 392 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 BCORP1Q8N888 145 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 WDR36Q8NI36 951 aaKnown RBP4.45□□□□□ -1.7
PRKDC-208ENST00000536710 MIPOL1Q8TD10 442 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 SSC4DQ8WTU2 575 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 NR4A3Q92570 626 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 MOCOSQ96EN8 888 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 ZNF597Q96LX8 424 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 CHCHD5Q9BSY4 110 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 APOOQ9BUR5 198 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 LRRC61Q9BV99 259 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 CCSER1Q9C0I3 900 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 IL1RL2Q9HB29 575 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 GTSE1Q9NYZ3 720 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 RARRES3Q9UL19 164 aa4.45□□□□□ -1.7
PRKDC-208ENST00000536710 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.45□□□□□ -1.7
PRKDC-208ENST00000536710 TEX48A0A1B0GUV7 120 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 RNF212BA8MTL3 300 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 F8WDY8 70 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 H3BMH7 237 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 K7EQG2 157 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 NTN3O00634 580 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 CYB561D2O14569 222 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 NOL3O60936 208 aaKnown RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 VPS26AO75436 327 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 HPRP00739 348 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 CA3P07451 260 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 HSD17B1P14061 328 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 TSPAN8P19075 237 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 IL4RP24394 825 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 CYP2F1P24903 491 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 MAT2AP31153 395 aaKnown RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 SLC1A4P43007 532 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 TRPC1P48995 793 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ERVK11-1P61568 191 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 HERVK_113P63132 956 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ERVK-8P63133 956 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 HSF2Q03933 536 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 KLHL30Q0D2K2 578 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 FUT7Q11130 342 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 HYAL1Q12794 435 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ITPK1Q13572 414 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 SIX1Q15475 284 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 PARP6Q2NL67 630 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 RHBDD2Q6NTF9 364 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ZNF613Q6PF04 617 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 ERASQ7Z444 233 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 RANBP3LQ86VV4 465 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 CCDC71Q8IV32 467 aaPredicted RBP4.44□□□□□ -1.7
PRKDC-208ENST00000536710 TSPAN18Q96SJ8 248 aa4.44□□□□□ -1.7
PRKDC-208ENST00000536710 HSD17B14Q9BPX1 270 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms