RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 VPS4AQ9UN37 437 aa12.58□□□□□ -0.4
RPAIN-205ENST00000536255 ERVK-19Q9WJR5 959 aa12.58□□□□□ -0.4
RPAIN-205ENST00000536255 COPG1Q9Y678 874 aaKnown RBP12.58□□□□□ -0.4
RPAIN-205ENST00000536255 TRAV17A0A0B4J275 112 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 A0A1W2PS29 197 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 OR6C76A6NM76 312 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 SCAMP2O15127 329 aaKnown RBP12.57□□□□□ -0.4
RPAIN-205ENST00000536255 PDPK1O15530 556 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 MAN1A2O60476 641 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 DIAPH2O60879 1101 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 BCAS2O75934 225 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-205ENST00000536255 IGKV3-11P04433 115 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 G6PDP11413 515 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 EPHA3P29320 983 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 MAP4K2Q12851 820 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 PDE7AQ13946 482 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 PTGR1Q14914 329 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF750Q32MQ0 723 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 RNF111Q6ZNA4 994 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 DGAT2L6Q6ZPD8 337 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 SLC29A4Q7RTT9 530 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CCDC116Q8IYX3 515 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CEP70Q8NHQ1 597 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 ZFP28Q8NHY6 868 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF675Q8TD23 568 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 ZBED6CLQ96FA7 236 aaPredicted RBP12.57□□□□□ -0.4
RPAIN-205ENST00000536255 MAELQ96JY0 434 aaKnown RBP12.57□□□□□ -0.4
RPAIN-205ENST00000536255 SIKE1Q9BRV8 207 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CDCP1Q9H5V8 836 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 RYDENQ9NUL5 291 aaKnown RBP12.57□□□□□ -0.4
RPAIN-205ENST00000536255 ASF1BQ9NVP2 202 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CFL2Q9Y281 166 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 NTNG1Q9Y2I2 539 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CNTRLQ7Z7A1 2325 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 CPAMD8Q8IZJ3 1885 aa12.57□□□□□ -0.4
RPAIN-205ENST00000536255 NBASA2RRP1 2371 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 GOLGA8QA0A0J9YX86 632 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 GOLGA8OA6NCC3 632 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 GABRR3A8MPY1 467 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 MYO1GB0I1T2 1018 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 TCP11X1B4DZS4 312 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 GOLGA8NF8WBI6 632 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 NCBP2P52298 156 aaKnown RBP eCLIP12.56□□□□□ -0.43e-8■■□□□ 11.6
RPAIN-205ENST00000536255 CLDN8P56748 225 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 MLF1P58340 268 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 C21orf58P58505 322 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 RNF4P78317 190 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 FUT7Q11130 342 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 PRICKLE4Q2TBC4 344 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 CPTPQ5TA50 214 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 RPUSD3Q6P087 351 aaKnown RBP12.56□□□□□ -0.4
RPAIN-205ENST00000536255 FAM180BQ6P0A1 224 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 EPGNQ6UW88 154 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 ARMC10Q8N2F6 343 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 SUN3Q8TAQ9 357 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 NUBPLQ8TB37 319 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 BARD1Q99728 777 aaKnown RBP12.56□□□□□ -0.4
RPAIN-205ENST00000536255 UTP23Q9BRU9 249 aaKnown RBP12.56□□□□□ -0.4
RPAIN-205ENST00000536255 DPY30Q9C005 99 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 OR10A5Q9H207 317 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 WDR55Q9H6Y2 383 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-205ENST00000536255 MAT2BQ9NZL9 334 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 ATP6V1HQ9UI12 483 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF223Q9UK11 482 aaPredicted RBP12.56□□□□□ -0.4
RPAIN-205ENST00000536255 EXO1Q9UQ84 846 aaKnown RBP12.56□□□□□ -0.4
RPAIN-205ENST00000536255 RELNP78509 3460 aa12.56□□□□□ -0.4
RPAIN-205ENST00000536255 PRRC2CQ9Y520 2896 aaKnown RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF195O14628 629 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 POLR3GO15318 223 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 PRAMEF2O60811 474 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 EDF1O60869 148 aaKnown RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 IDO1P14902 403 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 GNLYP22749 145 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 UQCRFS1P47985 274 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 CLNS1AP54105 237 aaKnown RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 DIO3P55073 304 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 SLC37A1P57057 533 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 TUBA3CQ13748 450 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 INAQ16352 499 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 DPY19L1Q2PZI1 675 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF628Q5EBL2 1059 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 HLA-DQA1Q5Y7H0 255 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 TUBA3EQ6PEY2 450 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 MAVSQ7Z434 540 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 HORMAD2Q8N7B1 307 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 ZNF321PQ8N8H1 164 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 ADCY4Q8NFM4 1077 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 OR9A2Q8NGT5 310 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 THAP3Q8WTV1 239 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 CTHRC1Q96CG8 243 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 TCF7L2Q9NQB0 619 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 AGPAT4Q9NRZ5 378 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 ACSS1Q9NUB1 689 aaPredicted RBP12.55□□□□□ -0.4
RPAIN-205ENST00000536255 ANKRD10Q9NXR5 420 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 MYOTQ9UBF9 498 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 PRODH2Q9UF12 536 aa12.55□□□□□ -0.4
RPAIN-205ENST00000536255 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms