RNA–Protein interactions for RNA: ENST00000535934.2

POLE-208, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 5

Gene POLE, Length 1,561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-208	ENST00000535934	SIGLEC12	Q96PQ1	595 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	LPAR4	Q99677	370 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	NEURL2	Q9BR09	285 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	HES7	Q9BYE0	225 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	C12orf65	Q9H3J6	166 aa	Known RBP	13.2	□□□□□ -0.3
POLE-208	ENST00000535934	DNAJC11	Q9NVH1	559 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	COPG2	Q9UBF2	871 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CLDN16	Q9Y5I7	305 aa		13.2	□□□□□ -0.3
POLE-208	ENST00000535934	CREBBP	Q92793	2442 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	SLCO1B7	G3V0H7	640 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	TGFBR3L	H3BV60	316 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	STK16	O75716	305 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	DDAH2	O95865	285 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	RNH1	P13489	461 aa	Known RBP	13.19	□□□□□ -0.3
POLE-208	ENST00000535934	DCK	P27707	260 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	SPR	P35270	261 aa	Predicted RBP	13.19	□□□□□ -0.3
POLE-208	ENST00000535934	HNRNPF	P52597	415 aa	Known RBP	13.19	□□□□□ -0.3
POLE-208	ENST00000535934	KCNK10	P57789	538 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	ATP6V0D1	P61421	351 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	PMP22	Q01453	160 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	TUBA3C	Q13748	450 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	DOC2A	Q14183	400 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	EXT1	Q16394	746 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	C4orf17	Q53FE4	359 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	PIGG	Q5H8A4	983 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	C6orf52	Q5T4I8	152 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	GRTP1	Q5TC63	336 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	ZNF468	Q5VIY5	522 aa	Predicted RBP	13.19	□□□□□ -0.3
POLE-208	ENST00000535934	SULT1C3	Q6IMI6	304 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	TUBA3E	Q6PEY2	450 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	TMEM52	Q8NDY8	209 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	HIPK4	Q8NE63	616 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	ELP5	Q8TE02	316 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	NR4A3	Q92570	626 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	QRFPR	Q96P65	431 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	EBF4	Q9BQW3	602 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	ALG9	Q9H6U8	611 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	IGSF5	Q9NSI5	407 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	WWOX	Q9NZC7	414 aa		13.19	□□□□□ -0.3
POLE-208	ENST00000535934	MARCO	Q9UEW3	520 aa	Predicted RBP	13.19	□□□□□ -0.3
POLE-208	ENST00000535934	TCRBV16S1A1N1	A0A5B0	115 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934		A8MUA0	341 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	LRRTM2	O43300	516 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ERI3	O43414	337 aa	Known RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	PRAMEF2	O60811	474 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	SULT1C4	O75897	302 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	STAMBP	O95630	424 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	NCF2	P19878	526 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	PLA2G16	P53816	162 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ABCE1	P61221	599 aa	Known RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ILF2	Q12905	390 aa	Known RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	TRAP1	Q12931	704 aa	Known RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ADPRM	Q3LIE5	342 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	CDKL4	Q5MAI5	379 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	SPINK14	Q6IE38	97 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	QSOX2	Q6ZRP7	698 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	FRMD7	Q6ZUT3	714 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	MDS2	Q8NDY4	140 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	NFAM1	Q8NET5	270 aa	Predicted RBP	13.18	□□□□□ -0.3
POLE-208	ENST00000535934	EXT2	Q93063	718 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	GAL3ST3	Q96A11	431 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	WDR34	Q96EX3	536 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ZNF354B	Q96LW1	612 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	C5orf34	Q96MH7	638 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ATOH8	Q96SQ7	321 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	PSD2	Q9BQI7	771 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	MECR	Q9BV79	373 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	NT5DC2	Q9H857	520 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	EFCAB1	Q9HAE3	211 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	GPRC5B	Q9NZH0	403 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	CD274	Q9NZQ7	290 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	TEKT2	Q9UIF3	430 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	ERGIC3	Q9Y282	383 aa		13.18	□□□□□ -0.3
POLE-208	ENST00000535934	URAD	A6NGE7	173 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	TRIM64	A6NGJ6	449 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	PSMD12	O00232	456 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-208	ENST00000535934	GSTT2	P0CG29	244 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	GSTT2B	P0CG30	244 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	MTHFD2	P13995	350 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	ZNF26	P17031	533 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-208	ENST00000535934	TFEB	P19484	476 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	JAK1	P23458	1154 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	PPP2R1B	P30154	601 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	STT3A	P46977	705 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	PCYT1A	P49585	367 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	EIF2B2	P49770	351 aa	Known RBP	13.17	□□□□□ -0.3
POLE-208	ENST00000535934	SKP1	P63208	163 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	BMPR2	Q13873	1038 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	XKR6	Q5GH73	641 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	ZNF766	Q5HY98	468 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	EPGN	Q6UW88	154 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	UBE3D	Q7Z6J8	389 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	CENPL	Q8N0S6	344 aa	Predicted RBP	13.17	□□□□□ -0.3
POLE-208	ENST00000535934	TCAIM	Q8N3R3	496 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	CPSF7	Q8N684	471 aa	Known RBP	13.17	□□□□□ -0.3
POLE-208	ENST00000535934	SNX31	Q8N9S9	440 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	C12orf43	Q96C57	262 aa	Known RBP	13.17	□□□□□ -0.3
POLE-208	ENST00000535934	NXNL1	Q96CM4	212 aa		13.17	□□□□□ -0.3
POLE-208	ENST00000535934	EHD1	Q9H4M9	534 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms