RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 BUD31P41223 144 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 CORO7P57737 925 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 NUP107P57740 925 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PLIN5Q00G26 463 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PLGLB1Q02325 96 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 MPEG1Q2M385 716 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 KRTCAP3Q53RY4 240 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 DCST1Q5T197 706 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OR52E8Q6IFG1 317 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 ANKRD26P1Q6NSI1 321 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 NPSR1Q6W5P4 371 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 ZYG11AQ6WRX3 759 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 RTL4Q6ZR62 310 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 FAM47EQ6ZV65 393 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 SEM1Q6ZVN7 128 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 TRILQ7L0X0 811 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 TAOK1Q7L7X3 1001 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 C10orf107Q8IVU9 208 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 CCDC116Q8IYX3 515 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 GHDCQ8N2G8 530 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 HORMAD2Q8N7B1 307 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OR4N2Q8NGD1 307 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OR4K14Q8NGD5 310 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OR9A2Q8NGT5 310 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OR8K3Q8NH51 312 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 NUBPLQ8TB37 319 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 FAM57AQ8TBR7 257 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PAQR8Q8TEZ7 354 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 C16orf78Q8WTQ4 265 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 EXOSC8Q96B26 276 aaKnown RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 NTNG2Q96CW9 530 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 REPS1Q96D71 796 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 SPACA9Q96E40 222 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 GNRHR2Q96P88 292 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 NODALQ96S42 347 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 ITPAQ9BY32 194 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 BRINP2Q9C0B6 783 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 TSPYL1Q9H0U9 437 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 OR10A5Q9H207 317 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 TUBB1Q9H4B7 451 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF395Q9H8N7 513 aaPredicted RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 GALNT9Q9HCQ5 603 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 MID1IP1Q9NPA3 183 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 FLRT3Q9NZU0 649 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 VPS29Q9UBQ0 182 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF639Q9UID6 485 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 PLLPQ9Y342 182 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 FAM215AQ9Y5M1 114 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.85□□□□□ -0.99
SSBP3-215ENST00000533946 SPACA6W5XKT8 324 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 VPS13CQ709C8 3753 aa8.85□□□□□ -0.99
SSBP3-215ENST00000533946 IQANK1A0A1B0GTG1 560 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 C2orf92A0A1B0GVN3 265 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 CHRNGP07510 517 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 ESRRAP11474 423 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 PORP16435 677 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 KRT4P19013 534 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 TLX1P31314 330 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 HPDP32754 393 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 EMDP50402 254 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 SLC18A2Q05940 514 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 PMPCAQ10713 525 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 LCP2Q13094 533 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 RCN2Q14257 317 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 PCLAFQ15004 111 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF630Q2M218 657 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 GXYLT1Q4G148 440 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 METTL2BQ6P1Q9 378 aaKnown RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 ZCCHC23Q6ZST2 131 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 GALNT12Q8IXK2 581 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 OR7G2Q8NG99 324 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 OR52R1Q8NGF1 315 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 CDC26Q8NHZ8 85 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 SDCCAG3Q96C92 435 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 CTHRC1Q96CG8 243 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 KLHL29Q96CT2 875 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 MTBPQ96DY7 904 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 JSRP1Q96MG2 331 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 GATA5Q9BWX5 397 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 RTN4RQ9BZR6 473 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 NPDC1Q9NQX5 325 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 SACM1LQ9NTJ5 587 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 MS4A12Q9NXJ0 267 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 COPS7AQ9UBW8 275 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 TMCO1Q9UM00 188 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 RNF6Q9Y252 685 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 SLC6A5Q9Y345 797 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 FIS1Q9Y3D6 152 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 POLR3HQ9Y535 204 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-215ENST00000533946 ARHGAP21Q5T5U3 1957 aa8.84□□□□□ -0.99
SSBP3-215ENST00000533946 GNB5O14775 395 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 PCDH7O60245 1069 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 UGT2B11O75310 529 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 TRIM3O75382 744 aaPredicted RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 TOXO94900 526 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ESRRBO95718 433 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 IGHG3P01860 377 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ABCB1P08183 1280 aaPredicted RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 MYL2P10916 166 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms