RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 SPDYE7PQ495Y7 208 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 METAP1DQ6UB28 335 aaPredicted RBP15.72■□□□□ 0.11
CTSB-228ENST00000533455 MRGPREQ86SM8 312 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 PEX5LQ8IYB4 626 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 MORN4Q8NDC4 146 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 VN1R2Q8NFZ6 395 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 OR4K5Q8NGD3 323 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 UFD1Q92890 307 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 TMEM203Q969S6 136 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 LRIG1Q96JA1 1093 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 COQ10AQ96MF6 247 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 TREX2Q9BQ50 279 aaPredicted RBP15.72■□□□□ 0.11
CTSB-228ENST00000533455 GON7Q9BXV9 100 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 MS4A8Q9BY19 250 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.72■□□□□ 0.11
CTSB-228ENST00000533455 P2RX2Q9UBL9 471 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 FBXW2Q9UKT8 454 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 CCL26Q9Y258 94 aa15.72■□□□□ 0.11
CTSB-228ENST00000533455 YARS2Q9Y2Z4 477 aaKnown RBP15.72■□□□□ 0.11
CTSB-228ENST00000533455 EXOSC1Q9Y3B2 195 aaKnown RBP15.72■□□□□ 0.11
CTSB-228ENST00000533455 PRAMEF27A3QJZ7 478 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 PRODHO43272 600 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 PROM1O43490 865 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 SH3BP5O60239 455 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 LRG1P02750 347 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 GAAP10253 952 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 PTBP1P26599 531 aaKnown RBP eCLIP15.71■□□□□ 0.11
CTSB-228ENST00000533455 ERP29P30040 261 aaKnown RBP15.71■□□□□ 0.11
CTSB-228ENST00000533455 GABRA5P31644 462 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 MAP2K3P46734 347 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 SMSP52788 366 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 GNG2P59768 71 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 HSPB3Q12988 150 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 SNAP47Q5SQN1 464 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 COMTD1Q86VU5 262 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 CAMKK1Q8N5S9 505 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 TMEM163Q8TC26 289 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 LINC00615Q96LM1 132 aaPredicted RBP15.71■□□□□ 0.11
CTSB-228ENST00000533455 FNDC11Q9BVV2 318 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 ABCG4Q9H172 646 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 DPEP2Q9H4A9 486 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 NDRG2Q9UN36 371 aaKnown RBP15.71■□□□□ 0.11
CTSB-228ENST00000533455 CARD8Q9Y2G2 431 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 GSTK1Q9Y2Q3 226 aa15.71■□□□□ 0.11
CTSB-228ENST00000533455 C17orf113A0A1B0GUU1 675 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 M0R3H8 397 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 TNFRSF10AO00220 468 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 CSF2P04141 144 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 EPHX1P07099 455 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 TYRP14679 529 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 GSTM3P21266 225 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 CCL23P55773 120 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 MLC1Q15049 377 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 GPR19Q15760 415 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 MINDY4Q4G0A6 757 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 CRTC2Q53ET0 693 aaPredicted RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 OR2G6Q5TZ20 316 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 SLC36A4Q6YBV0 504 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 TRAPPC5Q8IUR0 188 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 SYT14Q8NB59 555 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 PLA2G15Q8NCC3 412 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 OR52P1PQ8NH57 321 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 ZFAND1Q8TCF1 268 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 IRF7Q92985 503 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 C1GALT1C1Q96EU7 318 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 RNFT2Q96EX2 444 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 ZBED6CLQ96FA7 236 aaPredicted RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 TRAF4Q9BUZ4 470 aaPredicted RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 ZDHHC5Q9C0B5 715 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 OR2AG1Q9H205 316 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 PPP1R3EQ9H7J1 279 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 PELI2Q9HAT8 420 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 ACSS1Q9NUB1 689 aaPredicted RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 TRDV1A0A1B0GX56 115 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 SNTNA6NMZ2 147 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 TGM5O43548 720 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 LILRB3O75022 631 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 CD83Q01151 205 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 UBE3AQ05086 875 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 RIN1Q13671 783 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 GRIN2CQ14957 1233 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 SYPL1Q16563 259 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 PARS2Q7L3T8 475 aaKnown RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 TRMT11Q7Z4G4 463 aaKnown RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 PDZD3Q86UT5 571 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 IQCHQ86VS3 1027 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 DUSP18Q8NEJ0 188 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 ATP6V1C2Q8NEY4 427 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 UBASH3BQ8TF42 649 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 CYB5D2Q8WUJ1 264 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 JPH3Q8WXH2 748 aaPredicted RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 SLC35G5Q96KT7 338 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 PRRC1Q96M27 445 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 QRFPRQ96P65 431 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 GPA33Q99795 319 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 RBFOX1Q9NWB1 397 aaKnown RBP15.7■□□□□ 0.1
CTSB-228ENST00000533455 PCDHGB7Q9Y5F8 929 aa15.7■□□□□ 0.1
CTSB-228ENST00000533455 NOTOA8MTQ0 251 aa15.69■□□□□ 0.1
CTSB-228ENST00000533455 RTCAO00442 366 aaKnown RBP15.69■□□□□ 0.1
CTSB-228ENST00000533455 FAM157BP0CG42 384 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms