RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 GHRHRQ02643 423 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 ABHD18Q0P651 414 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 SCGB2A2Q13296 93 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 TMPRSS11BQ86T26 416 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 NAA40Q86UY6 237 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 CSPG4P5Q96PW8 444 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 GSX2Q9BZM3 304 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 NAP1L6A6NFF2 107 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 SMLR1H3BR10 107 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 TNFRSF10BO14763 440 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 GNB3P16520 340 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 GTF2BQ00403 316 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 CRHR2Q13324 411 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 TNFAIP8L2Q6P589 184 aaPredicted RBP7.52□□□□□ -1.21
CSRP1-218ENST00000533402 HASPINQ8TF76 798 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 TRIB2Q92519 343 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 DPF1Q92782 380 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 YIPF4Q9BSR8 244 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 SLC6A17Q9H1V8 727 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 MAN2C1Q9NTJ4 1040 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 SOBPA7XYQ1 873 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 GIFP27352 417 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 CXCR3P49682 368 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 PROX2Q3B8N5 592 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 SLC35F1Q5T1Q4 408 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 FAM199XQ6PEV8 388 aaPredicted RBP7.52□□□□□ -1.21
CSRP1-218ENST00000533402 ZNF852Q6ZMS4 543 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 PXKQ7Z7A4 578 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 NAXEQ8NCW5 288 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 JOSD2Q8TAC2 188 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 CD99L2Q8TCZ2 262 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 RAB39BQ96DA2 213 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 SUCNR1Q9BXA5 334 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 NAA50Q9GZZ1 169 aaKnown RBP7.52□□□□□ -1.21
CSRP1-218ENST00000533402 LDAHQ9H6V9 325 aa7.52□□□□□ -1.21
CSRP1-218ENST00000533402 MRPS30Q9NP92 439 aaKnown RBP7.52□□□□□ -1.21
CSRP1-218ENST00000533402 EIF2B3Q9NR50 452 aaKnown RBP7.52□□□□□ -1.21
CSRP1-218ENST00000533402 A0A0U1RQK1 487 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 FAM159BA6NKW6 160 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ARPC1BO15143 372 aaKnown RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 DUSP11O75319 330 aaKnown RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 C22orf31O95567 290 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 TNFSF8P32971 234 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 NRIP1P48552 1158 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 EIF2B1Q14232 305 aaKnown RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 PDZD11Q5EBL8 140 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ADAM5Q6NVV9 412 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 NPAS4Q8IUM7 802 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 KREMEN1Q96MU8 473 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ARHGAP39Q9C0H5 1083 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 OR51I1Q9H343 314 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 GLOD4Q9HC38 313 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 PUS1Q9Y606 427 aaKnown RBP eCLIP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 SYN3O14994 580 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 TREHO43280 583 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 IGHEP01854 428 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 LGALS2P05162 132 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 PRPS1L1P21108 318 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 SSR2P43308 183 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 CDK5R2Q13319 367 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 FAM69AQ5T7M9 428 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 TTLL10Q6ZVT0 673 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 FBXO27Q8NI29 283 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 OSTF1Q92882 214 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 CNTNAP3Q9BZ76 1288 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 TDP1Q9NUW8 608 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 A0A0D9SG52 128 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 PRORSD1PA6NEY8 169 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ANKUB1A6NFN9 424 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 GGT3PA6NGU5 568 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ZNF780AO75290 641 aaPredicted RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 GGT2P36268 569 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ATP4BP51164 291 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 RHBDF2Q6PJF5 856 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 PRSS55Q6UWB4 352 aaPredicted RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 SYT14Q8NB59 555 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ZMIZ2Q8NF64 920 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 FKBP10Q96AY3 582 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 IMP3Q9NV31 184 aaKnown RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 NDRG3Q9UGV2 375 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 MAFO75444 373 aaPredicted RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 MED6O75586 246 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 HRGP04196 525 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ZNF823P16415 610 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 PCSK6P29122 969 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 CMPK1P30085 196 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 LASP1Q14847 261 aaKnown RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 CYBRD1Q53TN4 286 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 H3F3CQ6NXT2 135 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 BLOC1S3Q6QNY0 202 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 OR56B2PQ8NGI1 322 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 SLC35B4Q969S0 331 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ADAD1Q96M93 576 aaKnown RBP7.51□□□□□ -1.21
CSRP1-218ENST00000533402 BTBD2Q9BX70 525 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 SLC6A16Q9GZN6 736 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 TUBB1Q9H4B7 451 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 ARNT2Q9HBZ2 717 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 IGKV6D-41A0A0C4DH26 115 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 A0A1W2PS29 197 aa7.51□□□□□ -1.21
CSRP1-218ENST00000533402 TMEM72A0PK05 275 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms