RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 NHSL2Q5HYW2 709 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 ATXN7L2Q5T6C5 722 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 C9orf64Q5T6V5 341 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 SLC9C2Q5TAH2 1124 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 MFSD14CQ5VZR4 134 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 BSPRYQ5W0U4 402 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 METTL7BQ6UX53 244 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 STRADAQ7RTN6 431 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 MYPOPQ86VE0 399 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 C10orf107Q8IVU9 208 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 GPR65Q8IYL9 337 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 FAM185AQ8N0U4 392 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 C9orf62Q8N4C0 152 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 RASGEF1AQ8N9B8 481 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 ACBD4Q8NC06 268 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 CPEB3Q8NE35 698 aaKnown RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 DBF4BQ8NFT6 615 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 OR2T34Q8NGX1 318 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 OR2T3Q8NH03 318 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 ART4Q93070 314 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 CREB3L1Q96BA8 519 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 NSUN4Q96CB9 384 aaKnown RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 TIFAQ96CG3 184 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 BSCL2Q96G97 398 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 ZC3HAV1LQ96H79 300 aaKnown RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 GLT1D1Q96MS3 346 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 NOL4LQ96MY1 436 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 RDH12Q96NR8 316 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 EBF4Q9BQW3 602 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 MXRA8Q9BRK3 442 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 NDC1Q9BTX1 674 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 KATNB1Q9BVA0 655 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 DDA1Q9BW61 102 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 TEX101Q9BY14 249 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 UGT2B28Q9BY64 529 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 GPR88Q9GZN0 384 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 PDZD7Q9H5P4 517 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 MLXIPQ9HAP2 919 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 POLD4Q9HCU8 107 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 SIRT3Q9NTG7 399 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 MAN2C1Q9NTJ4 1040 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 ZNF701Q9NV72 531 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 ERVK-18Q9QC07 812 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 TRPC5Q9UL62 973 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 SLC45A2Q9UMX9 530 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 POMPQ9Y244 141 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 PLEKHA6Q9Y2H5 1048 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 MAB21L2Q9Y586 359 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 OR51B4Q9Y5P0 310 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 HEMK1Q9Y5R4 338 aaPredicted RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 PEX16Q9Y5Y5 336 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 SPACA6W5XKT8 324 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 YLPM1P49750 1951 aaKnown RBP5.22□□□□□ -1.57
CD44-236ENST00000533222 OTOFQ9HC10 1997 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 ZNF541Q9H0D2 1346 aa5.22□□□□□ -1.57
CD44-236ENST00000533222 ZNF142P52746 1687 aaPredicted RBP5.21□□□□□ -1.57
CD44-236ENST00000533222 CLTCQ00610 1675 aaKnown RBP5.21□□□□□ -1.57
CD44-236ENST00000533222 MED1Q15648 1581 aaPredicted RBP5.21□□□□□ -1.57
CD44-236ENST00000533222 ATAD5Q96QE3 1844 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 A0A0G2JLW4 131 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 SLC22A23A1A5C7 686 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 FAM234BA2RU67 622 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 CDHR4A6H8M9 788 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 GRXCR1A8MXD5 290 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 TSTD3H0UI37 97 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 M0QYV0 167 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 F2RL2O00254 374 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 SLC28A1O00337 649 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 BTN3A3O00478 584 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 FCHO1O14526 889 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ADAM10O14672 748 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 MDM4O15151 490 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ZNF821O75541 412 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 SCO1O75880 301 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 BEST1O76090 585 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PDE8BO95263 885 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 C22orf31O95567 290 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 TTC4O95801 387 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 BMP15O95972 392 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 TOP3BO95985 862 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 STAG3L1P0CL83 205 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ADORA3P0DMS8 318 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 HIST1H1BP16401 226 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 TSHRP16473 764 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ACRV1P26436 265 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 CDC25AP30304 524 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 S100A11P31949 105 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 MAP3K8P41279 467 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 DPP6P42658 865 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 MAGEB1P43366 347 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 PRELPP51888 382 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 AGFG1P52594 562 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 YBEYP58557 167 aaPredicted RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 AP3S2P59780 193 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 RAB2AP61019 212 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 ABCE1P61221 599 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 ERVK-25P63136 954 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 BLOC1S1P78537 153 aa5.21□□□□□ -1.58
CD44-236ENST00000533222 MRPS11P82912 194 aaKnown RBP5.21□□□□□ -1.58
CD44-236ENST00000533222 TROAPQ12815 778 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms