RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 MGAT2Q10469 447 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 MAP4K2Q12851 820 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 GALNT18Q6P9A2 607 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 RPTNQ6XPR3 784 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 TRABD2AQ86V40 505 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 DOLPP1Q86YN1 238 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 VWA5B2Q8N398 1253 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 FAM13CQ8NE31 585 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 CNRIP1Q96F85 164 aaPredicted RBP27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF681Q96N22 645 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 BRINP2Q9C0B6 783 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 ZDHHC11Q9H8X9 412 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 IL1RL2Q9HB29 575 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 SIRT5Q9NXA8 310 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 UTS2RQ9UKP6 389 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 MEMO1Q9Y316 297 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 PLLPQ9Y342 182 aa27.92■■■□□ 2.06
SSSCA1-207ENST00000533115 CRCPO75575 148 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 PDE9AO76083 593 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 PIGAP37287 484 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 DUSP2Q05923 314 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 FOXO1Q12778 655 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 SPDYAQ5MJ70 313 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 FAM180BQ6P0A1 224 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 FAM111BQ6SJ93 734 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 MRGPRGQ86SM5 289 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 C10orf107Q8IVU9 208 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF808Q8N4W9 903 aaPredicted RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 C16orf78Q8WTQ4 265 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 CAVIN3Q969G5 261 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 ADIPOR1Q96A54 375 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 APOPT1Q96IL0 206 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 ROPN1BQ9BZX4 212 aaPredicted RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 IQCGQ9H095 443 aaKnown RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 ROPN1Q9HAT0 212 aaPredicted RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 TUBA8Q9NY65 449 aaPredicted RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 MAT2BQ9NZL9 334 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 NOL12Q9UGY1 213 aaKnown RBP eCLIP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 LGALS13Q9UHV8 139 aa27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 CHCHD2Q9Y6H1 151 aaPredicted RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 V9GYY5 206 aaPredicted RBP27.91■■■□□ 2.06
SSSCA1-207ENST00000533115 DCTP40126 519 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 ADORA2A-AS1P86434 159 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 PCLAFQ15004 111 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 NTRK2Q16620 822 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 ARHGAP11AQ6P4F7 1023 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 PAOXQ6QHF9 649 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 LRRC25Q8N386 305 aaPredicted RBP27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 FBXW8Q8N3Y1 598 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 BANPQ8N9N5 519 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 OR10G3Q8NGC4 313 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 FAM57AQ8TBR7 257 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 PHF12Q96QT6 1004 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 EBPLQ9BY08 206 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 TNFRSF12AQ9NP84 129 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 CNIH4Q9P003 139 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF639Q9UID6 485 aa27.9■■■□□ 2.06
SSSCA1-207ENST00000533115 CENPEQ02224 2701 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 ANXA4P09525 319 aaPredicted RBP27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 HEPACAMQ14CZ8 416 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 IMPG1Q17R60 797 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 HYAL4Q2M3T9 481 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 ZNF787Q6DD87 383 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 TRIM46Q7Z4K8 759 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 TMEM251Q8N6I4 163 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 C17orf47Q8NEP4 570 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 ADCY4Q8NFM4 1077 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 SHCBP1LQ9BZQ2 653 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 CFL2Q9Y281 166 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 NPFFR2Q9Y5X5 522 aa27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 SEC23IPQ9Y6Y8 1000 aaKnown RBP27.89■■■□□ 2.06
SSSCA1-207ENST00000533115 CAPN14A8MX76 684 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 UROSP10746 265 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 GPX3P22352 226 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 SOX18P35713 384 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 GSTM5P46439 218 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 NRG3P56975 720 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 ART3Q13508 389 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 PRAMEF20Q5VT98 475 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 TMEM64Q6YI46 380 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 SRRM1Q8IYB3 904 aaKnown RBP27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 FAM109AQ8N4B1 249 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 OR5M3Q8NGP4 307 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 CTHRC1Q96CG8 243 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 PFDN4Q9NQP4 134 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 BCAP29Q9UHQ4 241 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 DTX4Q9Y2E6 619 aa27.88■■■□□ 2.05
SSSCA1-207ENST00000533115 TRIM13O60858 407 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 TPOP07202 933 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 MAGEA5P43359 124 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 SMSP52788 366 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 KCNJ2P63252 427 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 DUSP8Q13202 625 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 EXOSC7Q15024 291 aaKnown RBP27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 LTB4RQ15722 352 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 CD163Q86VB7 1156 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 SAMD14Q8IZD0 417 aaPredicted RBP27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 EID3Q8N140 333 aa27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 EXOSC8Q96B26 276 aaKnown RBP27.87■■■□□ 2.05
SSSCA1-207ENST00000533115 GATA5Q9BWX5 397 aaPredicted RBP27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms