RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 OR10A5Q9H207 317 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 CENPHQ9H3R5 247 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 EML4Q9HC35 981 aaKnown RBP14.2□□□□□ -0.14
CPSF1-210ENST00000532935 DEPPQ9NTK1 212 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 MAT2BQ9NZL9 334 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 CCL27Q9Y4X3 112 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 POLR3HQ9Y535 204 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-210ENST00000532935 PTGDR2Q9Y5Y4 395 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF407Q9C0G0 2248 aa14.2□□□□□ -0.14
CPSF1-210ENST00000532935 NCKAP5O14513 1909 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 NBPF19A0A087WUL8 3843 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 A0A0G2JMM0 328 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 C2orf92A0A1B0GVN3 265 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 A0A1W2PPB8 328 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 A0A1W2PRS3 328 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 KIR3DP1A8MWS1 328 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 NPIPB8E9PQR5 432 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 LRRTM2O43300 516 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 RGS14O43566 566 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 CHEK2O96017 543 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 LDLRP01130 860 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 BPGMP07738 259 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 FGF4P08620 206 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 PRPH2P23942 346 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 RBPJQ06330 500 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 C2orf80Q0P641 193 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF791Q3KP31 576 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 NOXRED1Q6NXP6 359 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 LYPD8Q6UX82 237 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 EXOC3L1Q86VI1 746 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 DND1Q8IYX4 353 aaKnown RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 SAMD14Q8IZD0 417 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 ADCY4Q8NFM4 1077 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 C16orf52Q8NHV5 167 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 CDC26Q8NHZ8 85 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 ZBTB9Q96C00 473 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 SPACA9Q96E40 222 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 METTL2AQ96IZ6 378 aaKnown RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 TUBB1Q9H4B7 451 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 LRTM1Q9HBL6 345 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 SSU72Q9NP77 194 aaKnown RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 PFDN4Q9NQP4 134 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 RYDENQ9NUL5 291 aaKnown RBP14.19□□□□□ -0.14
CPSF1-210ENST00000532935 EHD3Q9NZN3 535 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 ZNF639Q9UID6 485 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 TRAF6Q9Y4K3 522 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 DNAJC15Q9Y5T4 150 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 DNAJC13O75165 2243 aa14.19□□□□□ -0.14
CPSF1-210ENST00000532935 WIPF3A6NGB9 483 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 TMEM233B4DJY2 109 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 G3V3Y1 287 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 TFECO14948 347 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-210ENST00000532935 ASNA1O43681 348 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SEC22BO75396 215 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SASH3O75995 380 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 FBXO45P0C2W1 286 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 CCL3P10147 92 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 NEFHP12036 1026 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 DDCP20711 480 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SOX18P35713 384 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SERPINB5P36952 375 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 NR0B1P51843 470 aaKnown RBP14.18□□□□□ -0.14
CPSF1-210ENST00000532935 EXOSC7Q15024 291 aaKnown RBP14.18□□□□□ -0.14
CPSF1-210ENST00000532935 KIAA0040Q15053 153 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 LTB4RQ15722 352 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 TNFAIP8L3Q5GJ75 292 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 C1QL3Q5VWW1 255 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 HLA-DQA1Q5Y7H0 255 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 FAM71E1Q6IPT2 247 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 LRIG3Q6UXM1 1119 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 Q6ZSR9 355 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 CROCCP2Q86T23 111 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 HOMEZQ8IX15 550 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 CCDC116Q8IYX3 515 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 CLYBLQ8N0X4 340 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 TAGAPQ8N103 731 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 OR2M7Q8NG81 312 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 OR6Y1Q8NGX8 325 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 OR2T11Q8NH01 316 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.18□□□□□ -0.14
CPSF1-210ENST00000532935 ADIPOR1Q96A54 375 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 TP53INP1Q96A56 240 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 CTHRC1Q96CG8 243 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SH2D2AQ9NP31 389 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 MYNNQ9NPC7 610 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 MED4Q9NPJ6 270 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SLC35C2Q9NQQ7 365 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 SACM1LQ9NTJ5 587 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 GIMAP4Q9NUV9 329 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 C1orf109Q9NX04 203 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 BCAP29Q9UHQ4 241 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 ENTPD4Q9Y227 616 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 WBP11Q9Y2W2 641 aaKnown RBP14.18□□□□□ -0.14
CPSF1-210ENST00000532935 FREM3P0C091 2139 aa14.18□□□□□ -0.14
CPSF1-210ENST00000532935 A0A1B0GUH1 482 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 PINLYPA6NC86 204 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 CBX7O95931 251 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 P04436 131 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 LINC00032P0C843 101 aa14.17□□□□□ -0.14
CPSF1-210ENST00000532935 PCSK2P16519 638 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms