RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 MPIP34949 423 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 SOX3P41225 446 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 DUSP8Q13202 625 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 EBPQ15125 230 aaKnown RBP18.38■□□□□ 0.53
CPSF1-209ENST00000532725 LTB4RQ15722 352 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 INAQ16352 499 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ATP6AP1LQ52LC2 224 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF628Q5EBL2 1059 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF324BQ6AW86 544 aaPredicted RBP18.38■□□□□ 0.53
CPSF1-209ENST00000532725 MDGA2Q7Z553 956 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 GPALPP1Q8IXQ4 340 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 KIRREL3Q8IZU9 778 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 VWA5B2Q8N398 1253 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF441Q8N8Z8 693 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 GALNT11Q8NCW6 608 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 SIMC1Q8NDZ2 872 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 RAB3IL1Q8TBN0 382 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF675Q8TD23 568 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ASB15Q8WXK1 588 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 GFM2Q969S9 779 aaKnown RBP18.38■□□□□ 0.53
CPSF1-209ENST00000532725 ADIPOR1Q96A54 375 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 C5orf34Q96MH7 638 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 TSSK3Q96PN8 268 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 WWTR1Q9GZV5 400 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 MANSC1Q9H8J5 431 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 MIEF1Q9NQG6 463 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 GIMAP4Q9NUV9 329 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 MAP10Q9P2G4 905 aa18.38■□□□□ 0.53
CPSF1-209ENST00000532725 C2orf92A0A1B0GVN3 265 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 TCP11X1B4DZS4 312 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 TBX19O60806 448 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 RASAL1O95294 804 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 CBX7O95931 251 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 PDCD2Q16342 344 aaPredicted RBP18.37■□□□□ 0.53
CPSF1-209ENST00000532725 MAPKAPK3Q16644 382 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 C6orf163Q5TEZ5 329 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 ATG16L1Q676U5 607 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 LYPD8Q6UX82 237 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 IL20RBQ6UXL0 311 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 GALNTL5Q7Z4T8 443 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 TRIM42Q8IWZ5 723 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 CYP4Z2PQ8N1L4 340 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 SLC15A4Q8N697 577 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 TMEM178AQ8NBL3 297 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 OR9A2Q8NGT5 310 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 DNAJB8Q8NHS0 232 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 C16orf52Q8NHV5 167 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 TP53INP1Q96A56 240 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 TUBGCP3Q96CW5 907 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF764Q96H86 408 aaPredicted RBP18.37■□□□□ 0.53
CPSF1-209ENST00000532725 BBS4Q96RK4 519 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 REEP4Q9H6H4 257 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 AGPAT4Q9NRZ5 378 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 ENTPD4Q9Y227 616 aa18.37■□□□□ 0.53
CPSF1-209ENST00000532725 A8MVJ9 347 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 AKAP10O43572 662 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 NME2P1O60361 137 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 VPS4BO75351 444 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 LRATO95237 230 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 CBX6O95503 412 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 PCSK2P16519 638 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 NME2P22392 152 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 MAPK1P28482 360 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 ASMTP46597 345 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 MRPS35P82673 323 aaKnown RBP18.36■□□□□ 0.53
CPSF1-209ENST00000532725 EMX2Q04743 252 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 EXOSC7Q15024 291 aaKnown RBP18.36■□□□□ 0.53
CPSF1-209ENST00000532725 SMU1Q2TAY7 513 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 IL23RQ5VWK5 629 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 OPN5Q6U736 354 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 FAM180AQ6UWF9 173 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 BCORP1Q8N888 145 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 CLHC1Q8NHS4 586 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF75CPQ92670 426 aaPredicted RBP18.36■□□□□ 0.53
CPSF1-209ENST00000532725 KAT2AQ92830 837 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 TMEM125Q96AQ2 219 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 ERP27Q96DN0 273 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 GAL3ST4Q96RP7 486 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 AKTIPQ9H8T0 292 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 RYDENQ9NUL5 291 aaKnown RBP18.36■□□□□ 0.53
CPSF1-209ENST00000532725 HPF1Q9NWY4 346 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 VPS4AQ9UN37 437 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 ERVK-11Q9UQG0 969 aa18.36■□□□□ 0.53
CPSF1-209ENST00000532725 ASPDHA6ND91 283 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 HMGB1P1B2RPK0 211 aaPredicted RBP18.35■□□□□ 0.53
CPSF1-209ENST00000532725 KLF11O14901 512 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 PLOD3O60568 738 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 EMDP50402 254 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 OCRLQ01968 901 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 PDE7AQ13946 482 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 ZNF791Q3KP31 576 aaPredicted RBP18.35■□□□□ 0.53
CPSF1-209ENST00000532725 FHL5Q5TD97 284 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 PNPLA5Q7Z6Z6 429 aaPredicted RBP18.35■□□□□ 0.53
CPSF1-209ENST00000532725 ATCAYQ86WG3 371 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 LIX1Q8N485 282 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 GOLGA6L1Q8N7Z2 621 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 FNDC5Q8NAU1 212 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 C17orf47Q8NEP4 570 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 OR52R1Q8NGF1 315 aa18.35■□□□□ 0.53
CPSF1-209ENST00000532725 SLC22A8Q8TCC7 542 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms