RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 NAGLUP54802 743 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 NRG3P56975 720 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 DNAJB13P59910 316 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 KCNJ2P63252 427 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 HMGCS1Q01581 520 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 MAP4K2Q12851 820 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 SLC10A1Q14973 349 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 SPDYAQ5MJ70 313 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 SCIMPQ6UWF3 145 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 C3P1Q6ZMU1 363 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 CD163Q86VB7 1156 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 MMP21Q8N119 569 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 FAM109AQ8N4B1 249 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 TMEM251Q8N6I4 163 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 ZNF615Q8N8J6 731 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 OR5M3Q8NGP4 307 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 RDH11Q8TC12 318 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 KCNA7Q96RP8 456 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 RUBCNLQ9H714 662 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 ANKZF1Q9H8Y5 726 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 SH2D2AQ9NP31 389 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 PFDN4Q9NQP4 134 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 TUBA8Q9NY65 449 aaPredicted RBP15.88■□□□□ 0.13
PHRF1-204ENST00000532550 BCAP29Q9UHQ4 241 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 UTS2RQ9UKP6 389 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 CFL2Q9Y281 166 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 DLGAP4Q9Y2H0 992 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 NPFFR2Q9Y5X5 522 aa15.88■□□□□ 0.13
PHRF1-204ENST00000532550 NCOA6Q14686 2063 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-204ENST00000532550 SERTM1A2A2V5 107 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 HNRNPRO43390 633 aaKnown RBP15.87■□□□□ 0.13
PHRF1-204ENST00000532550 PCDH7O60245 1069 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 ATP1B1P05026 303 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 S1PR1P21453 382 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 HTR1EP28566 365 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 MAGEA5P43359 124 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 FOXO1Q12778 655 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 HEPACAMQ14CZ8 416 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 NTRK2Q16620 822 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 HYAL4Q2M3T9 481 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 PRICKLE4Q2TBC4 344 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 PRAMEF20Q5VT98 475 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 CRYBG3Q68DQ2 2970 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 TMEM211Q6ICI0 200 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 FAM111BQ6SJ93 734 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 VWA5B2Q8N398 1253 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 FBXW8Q8N3Y1 598 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 ZNF441Q8N8Z8 693 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 OR10G3Q8NGC4 313 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 PHF10Q8WUB8 498 aaKnown RBP15.87■□□□□ 0.13
PHRF1-204ENST00000532550 APIPQ96GX9 242 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 LDAHQ9H6V9 325 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 CHST11Q9NPF2 352 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 OXSMQ9NWU1 459 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 HEY2Q9UBP5 337 aa15.87■□□□□ 0.13
PHRF1-204ENST00000532550 BOKQ9UMX3 212 aaPredicted RBP15.87■□□□□ 0.13
PHRF1-204ENST00000532550 ATP6AP2A0A1C7CYW4 349 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 NPIPA2E9PIF3 369 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 NPIPA3F8WFD2 350 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 UBFD1O14562 309 aaKnown RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 ATP6AP2O75787 350 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 IL3P08700 152 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 TMED10P49755 219 aaKnown RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 RAE1P78406 368 aaKnown RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 SLC18A2Q05940 514 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 MGAT2Q10469 447 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 IMPG1Q17R60 797 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 ZNF630Q2M218 657 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 FAM180BQ6P0A1 224 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 TMEM64Q6YI46 380 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 FRMD7Q6ZUT3 714 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 SAMD14Q8IZD0 417 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 C4orf33Q8N1A6 199 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 LRRC25Q8N386 305 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 C17orf47Q8NEP4 570 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 ADCY4Q8NFM4 1077 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 C16orf78Q8WTQ4 265 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 DIO2Q92813 273 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 ADIPOR1Q96A54 375 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 CNRIP1Q96F85 164 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 JSRP1Q96MG2 331 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 DMRTA2Q96SC8 542 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 IQCGQ9H095 443 aaKnown RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 TP63Q9H3D4 680 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 C12orf65Q9H3J6 166 aaKnown RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 EXO5Q9H790 373 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 ZFP64Q9NPA5 681 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 MAT2BQ9NZL9 334 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 MID2Q9UJV3 735 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 CHCHD2Q9Y6H1 151 aaPredicted RBP15.86■□□□□ 0.13
PHRF1-204ENST00000532550 ITPR2Q14571 2701 aa15.86■□□□□ 0.13
PHRF1-204ENST00000532550 CELSR2Q9HCU4 2923 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 ADAM10O14672 748 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 CLDN14O95500 239 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 IGHG3P01860 377 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 ANXA4P09525 319 aaPredicted RBP15.85■□□□□ 0.13
PHRF1-204ENST00000532550 TIA1P31483 386 aaKnown RBP eCLIP15.85■□□□□ 0.13
PHRF1-204ENST00000532550 FOXA1P55317 472 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 VSNL1P62760 191 aa15.85■□□□□ 0.13
PHRF1-204ENST00000532550 RPP38P78345 283 aaKnown RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms