RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PEX19P40855 299 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 MASP1P48740 699 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 DGKQP52824 942 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 PLTPP55058 493 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 C2orf54Q08AI8 447 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 CUL3Q13618 768 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 GTF2H2Q13888 395 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 TRADDQ15628 312 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 FBXL19-AS1Q494R0 122 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 EIPR1Q53HC9 387 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 HLA-DQA1Q5Y7H0 255 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 OR52E8Q6IFG1 317 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 GTF2H2CQ6P1K8 395 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 MAATS1Q7Z4T9 603 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 NUDT13Q86X67 352 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 GALNT12Q8IXK2 581 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 ZNF615Q8N8J6 731 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 WDR20Q8TBZ3 569 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 ADIPOR1Q96A54 375 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 TP53INP1Q96A56 240 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 REPS1Q96D71 796 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 MRRFQ96E11 262 aaKnown RBP16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 LRRC46Q96FV0 321 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 TRIB1Q96RU8 372 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 ANGPTL4Q9BY76 406 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 IPPKQ9H8X2 491 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 SNX15Q9NRS6 342 aa16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 ZNF629Q9UEG4 869 aaPredicted RBP16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 MTRF1LQ9UGC7 380 aaKnown RBP16.85■□□□□ 0.29
SSSCA1-206ENST00000531405 CAPN14A8MX76 684 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 GNB5O14775 395 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 BMP7P18075 431 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 PIK3R1P27986 724 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 STX2P32856 288 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 CASP3P42574 277 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 MAGEA4P43358 317 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 ALDH18A1P54886 795 aaKnown RBP16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 ADAM8P78325 824 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 NNATQ16517 81 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 WIPI1Q5MNZ9 446 aaPredicted RBP16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 MROH9Q5TGP6 573 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 NSUN5P2Q63ZY6 315 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 VASNQ6EMK4 673 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 DESI1Q6ICB0 168 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 PAMR1Q6UXH9 720 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 PACS2Q86VP3 889 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 PM20D2Q8IYS1 436 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 RHEBL1Q8TAI7 183 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 LINC01560Q8TB33 94 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 FBXO25Q8TCJ0 367 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 HSPBAP1Q96EW2 488 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 CDK15Q96Q40 435 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 ALPK1Q96QP1 1244 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 UGT2B28Q9BY64 529 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 OR10A5Q9H207 317 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 CPSF2Q9P2I0 782 aaKnown RBP16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 RNF14Q9UBS8 474 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 DTX4Q9Y2E6 619 aa16.84■□□□□ 0.29
SSSCA1-206ENST00000531405 A0A087X1B8 175 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 HMX2A2RU54 273 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 EEF1E1-BLOC1S5C9J1V9 151 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 EEF1E1O43324 174 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 UGDHO60701 494 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 SNX4O95219 450 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 C2P06681 752 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 TMED10P49755 219 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 FUT7Q11130 342 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 DAZAP2Q15038 168 aaPredicted RBP16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 FAM83EQ2M2I3 478 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 FBXW10Q5XX13 1052 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 MMP21Q8N119 569 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 L3MBTL4Q8NA19 623 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 SPATA4Q8NEY3 305 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 WDYHV1Q96HA8 205 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 DLL4Q9NR61 685 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 RYDENQ9NUL5 291 aaKnown RBP16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 FOXD3Q9UJU5 478 aaPredicted RBP16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 IKBKGQ9Y6K9 419 aa16.83■□□□□ 0.28
SSSCA1-206ENST00000531405 C2orf72A6NCS6 295 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 TUBAL3A6NHL2 446 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 FOXE1O00358 373 aaPredicted RBP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 OR7A17O14581 309 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 NT5EP21589 574 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 ABCD3P28288 659 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 PTPN6P29350 595 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 SOX18P35713 384 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 ARL1P40616 181 aaPredicted RBP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 XKP51811 444 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 NRG3P56975 720 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 PCBP2Q15366 365 aaKnown RBP eCLIP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 ZDHHC24Q6UX98 284 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 YRDCQ86U90 279 aaKnown RBP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 FAM83FQ8NEG4 500 aaPredicted RBP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 OR4K14Q8NGD5 310 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 OR52B6Q8NGF0 335 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 ABTB1Q969K4 478 aaPredicted RBP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 MBD6Q96DN6 1003 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 TMEM41AQ96HV5 264 aa16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 SECISBP2Q96T21 854 aaKnown RBP16.82■□□□□ 0.28
SSSCA1-206ENST00000531405 NXF5Q9H1B4 397 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms