RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 COX7A2P14406 83 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 ITGA2P17301 1181 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 ZNF10P21506 573 aaPredicted RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 GSTT1P30711 240 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 FBXW4P57775 412 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 IQCB1Q15051 598 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 EBPQ15125 230 aaKnown RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 RBBP5Q15291 538 aaKnown RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 KBTBD12Q3ZCT8 623 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 ZNF470Q6ECI4 717 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 ZNF549Q6P9A3 640 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 SBSNQ6UWP8 590 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 ENPP6Q6UWR7 440 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 P4HA3Q7Z4N8 544 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 KLHDC8AQ8IYD2 350 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 GPATCH11Q8N954 259 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 OR56A3Q8NH54 315 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 SGMS2Q8NHU3 365 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 SPPL2AQ8TCT8 520 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 CTHRC1Q96CG8 243 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 MS4A6EQ96DS6 147 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 ZNF845Q96IR2 970 aaPredicted RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 LCORQ96JN0 433 aaPredicted RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 AIF1LQ9BQI0 150 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 SLC39A3Q9BRY0 314 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 OR2B2Q9GZK3 357 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 WWTR1Q9GZV5 400 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 IL22Q9GZX6 179 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 C12orf49Q9H741 205 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 CHODLQ9H9P2 273 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 COPS7BQ9H9Q2 264 aaPredicted RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 BARX1Q9HBU1 254 aaPredicted RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 LMBRD1Q9NUN5 540 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 INTS10Q9NVR2 710 aaKnown RBP7.42□□□□□ -1.22
CD44-232ENST00000531118 SYBUQ9NX95 663 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 HEY2Q9UBP5 337 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 DAPP1Q9UN19 280 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 LIPT1Q9Y234 373 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 DHRS7Q9Y394 339 aa7.42□□□□□ -1.22
CD44-232ENST00000531118 GOLGA6L9A6NEM1 432 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 FRG2CA6NGY1 282 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 SERINC4A6NH21 518 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 PLOD2O00469 737 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 OR10H2O60403 315 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 LMX1BO60663 402 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 SNX4O95219 450 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 APRTP07741 180 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 KIR2DL2P43627 348 aaPredicted RBP7.41□□□□□ -1.22
CD44-232ENST00000531118 STT3AP46977 705 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 LHX2P50458 406 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 RWDD2BP57060 319 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 LOXL1Q08397 574 aaPredicted RBP7.41□□□□□ -1.22
CD44-232ENST00000531118 FAPQ12884 760 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 KLF1Q13351 362 aaPredicted RBP7.41□□□□□ -1.22
CD44-232ENST00000531118 RCN2Q14257 317 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 CSHL1Q14406 222 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 EFTUD2Q15029 972 aaKnown RBP eCLIP7.41□□□□□ -1.22
CD44-232ENST00000531118 DUPD1Q68J44 220 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 OR2A2Q6IF42 318 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 LRRC8EQ6NSJ5 796 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 ADAM5Q6NVV9 412 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 NXPE4Q6UWF7 544 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 ANGPTL8Q6UXH0 198 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 SLC29A4Q7RTT9 530 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 PPM1NQ8N819 430 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 CCT6BQ92526 530 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 ALG3Q92685 438 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 C1orf159Q96HA4 380 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 FBXL20Q96IG2 436 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 CCDC42Q96M95 316 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 KRT12Q99456 494 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 CHP1Q99653 195 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 RHNO1Q9BSD3 238 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 KIFC1Q9BW19 673 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 KLHL4Q9C0H6 718 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 CCDC68Q9H2F9 335 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 NHEJ1Q9H9Q4 299 aaPredicted RBP7.41□□□□□ -1.22
CD44-232ENST00000531118 PARVBQ9HBI1 364 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 FBXO6Q9NRD1 293 aaPredicted RBP7.41□□□□□ -1.22
CD44-232ENST00000531118 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.41□□□□□ -1.22
CD44-232ENST00000531118 KCNS2Q9ULS6 477 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 RNF112Q9ULX5 631 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 DLGAP4Q9Y2H0 992 aa7.41□□□□□ -1.22
CD44-232ENST00000531118 A0A1W2PP18 115 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 FAM234BA2RU67 622 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 SLC22A20A6NK97 555 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 TCF21O43680 179 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 FGF17O60258 216 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 CGAP01215 116 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 IFNB1P01574 187 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 CD8BP10966 210 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 PPP3CBP16298 524 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 ZNF708P17019 499 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 HNF1AP20823 631 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 MGAT1P26572 445 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 DPP4P27487 766 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 CETN2P41208 172 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 TMED10P49755 219 aaKnown RBP7.4□□□□□ -1.22
CD44-232ENST00000531118 PLA2G16P53816 162 aa7.4□□□□□ -1.22
CD44-232ENST00000531118 CLDN18P56856 261 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms