RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 DNAJC27Q9NZQ0 273 aa6.94□□□□□ -1.3
CTNND1-229ENST00000531014 RREB1Q92766 1687 aa6.94□□□□□ -1.3
CTNND1-229ENST00000531014 C5orf60A6NFR6 353 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CHEK1O14757 476 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SHOX2O60902 331 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SCO1O75880 301 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 IMPDH1P20839 514 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 PRPS1L1P21108 318 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 MMP8P22894 467 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 RFC3P40938 356 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 FOXM1Q08050 763 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 KIAA0141Q14154 515 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GAS6Q14393 721 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 RAB11BQ15907 218 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 NT5DC1Q5TFE4 455 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 C1orf53Q5VUE5 145 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 ASRGL1Q7L266 308 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 RASGEF1CQ8N431 466 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 FBXL6Q8N531 539 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 C15orf54Q8N8G6 183 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GCDHQ92947 438 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 MYO19Q96H55 970 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CARS2Q9HA77 564 aaKnown RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 FBRSL1Q9HCM7 1045 aaKnown RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 ERVK13-1Q9NX77 482 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 DCAF16Q9NXF7 216 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 NLGN3Q9NZ94 848 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 KLHL13Q9P2N7 655 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 IL20RAQ9UHF4 553 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 B3GALT1Q9Y5Z6 326 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 WDR90Q96KV7 1748 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TNS1Q9HBL0 1735 aaKnown RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TSPAN11A1L157 253 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 LYRM1O43325 122 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 HBE1P02100 147 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GAAP10253 952 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CBR1P16152 277 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CSNK2A2P19784 350 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TPSB2P20231 275 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 USF1P22415 310 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CCNOP22674 350 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 G0S2P27469 103 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CHRNB4P30926 498 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SREBF1P36956 1147 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 PPT1P50897 306 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 HSF1Q00613 529 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TPSAB1Q15661 275 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GPR68Q15743 365 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 AGAP6Q5VW22 663 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 BRICD5Q6PL45 260 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 UNC93AQ86WB7 457 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TRMT2AQ8IZ69 625 aaKnown RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 KLHDC1Q8N7A1 406 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SUMF1Q8NBK3 374 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 OR52E4Q8NGH9 312 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 OR52H1Q8NGJ2 320 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 OR5H6Q8NGV6 325 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 FNDC9Q8TBE3 224 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 IFI44Q8TCB0 444 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 NTAN1Q96AB6 310 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 LGALS12Q96DT0 336 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 MED30Q96HR3 178 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 AGAP4Q96P64 663 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GPR21Q99679 349 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CRB3Q9BUF7 120 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GATA5Q9BWX5 397 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 ACP6Q9NPH0 428 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 ASB4Q9Y574 426 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CNTNAP5Q8WYK1 1306 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CD300LBA8K4G0 201 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TMEM150CB9EJG8 249 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SEC14L2O76054 403 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CDK14O94921 469 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SCGB1C2P0DMR2 95 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CDKN1CP49918 316 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 GPX6P59796 221 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CACNG1Q06432 222 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SLC17A1Q14916 467 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 ADGRD1Q6QNK2 874 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TTLL10Q6ZVT0 673 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 MON1BQ7L1V2 547 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 AVL9Q8NBF6 648 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 ANGPTL6Q8NI99 470 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 PWWP2AQ96N64 755 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 PGLYRP2Q96PD5 576 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 CMKLR1Q99788 373 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 FDXACB1Q9BRP7 624 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 OR52A5Q9H2C5 316 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TMPRSS4Q9NRS4 437 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 KCND1Q9NSA2 647 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 TAS2R16Q9NYV7 291 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 FZD4Q9ULV1 537 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 NCANO14594 1321 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 H3BQ06 376 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-229ENST00000531014 MED6O75586 246 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 SERPINE2P07093 398 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 HLA-DOBP13765 273 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 HDCP19113 662 aa6.93□□□□□ -1.3
CTNND1-229ENST00000531014 COL9A1P20849 921 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms