RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 ENDOUP21128 410 aaKnown RBP19.2■□□□□ 0.66
SMPD1-204ENST00000530395 NT5EP21589 574 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 GDF1P27539 372 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 XKP51811 444 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 MAPK12P53778 367 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 FUT7Q11130 342 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 SGO1Q5FBB7 561 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 MMGT1Q8N4V1 131 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 OR7G1Q8NGA0 311 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 OR4F6Q8NGB9 312 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 MRPL1Q9BYD6 325 aaKnown RBP19.2■□□□□ 0.66
SMPD1-204ENST00000530395 OR10A5Q9H207 317 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 SLC6A15Q9H2J7 730 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 MRPL46Q9H2W6 279 aaKnown RBP19.2■□□□□ 0.66
SMPD1-204ENST00000530395 ZBTB26Q9HCK0 441 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 Q9UFV3 132 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 ZNF180Q9UJW8 692 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 NPFFR2Q9Y5X5 522 aa19.2■□□□□ 0.66
SMPD1-204ENST00000530395 A0A1W2PS29 197 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 GOLGA6L10A6NI86 522 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 RPS17P08708 135 aaKnown RBP19.19■□□□□ 0.66
SMPD1-204ENST00000530395 CPMP14384 443 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 MYBPHQ13203 477 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 SLC25A35Q3KQZ1 300 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 RIPPLY2Q5TAB7 128 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 CES4AQ5XG92 561 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 METTL4Q8N3J2 472 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 MNS1Q8NEH6 495 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 NEIL3Q8TAT5 605 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 SECISBP2Q96T21 854 aaKnown RBP19.19■□□□□ 0.66
SMPD1-204ENST00000530395 DMGDHQ9UI17 866 aaKnown RBP19.19■□□□□ 0.66
SMPD1-204ENST00000530395 SNX6Q9UNH7 406 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 SLC12A4Q9UP95 1085 aa19.19■□□□□ 0.66
SMPD1-204ENST00000530395 SPG11Q96JI7 2443 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 A0A087WUV0 522 aaPredicted RBP19.18■□□□□ 0.66
SMPD1-204ENST00000530395 C15orf38-AP3S2A0A0A6YYH1 394 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 C1orf226A1L170 272 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 TRIM49D1C9J1S8 452 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 TRIM3O75382 744 aaPredicted RBP19.18■□□□□ 0.66
SMPD1-204ENST00000530395 SNX4O95219 450 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 CT62P0C5K7 136 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 PORP16435 677 aaPredicted RBP19.18■□□□□ 0.66
SMPD1-204ENST00000530395 KRT15P19012 456 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 DEKP35659 375 aaKnown RBP19.18■□□□□ 0.66
SMPD1-204ENST00000530395 ADH7P40394 386 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 MASP1P48740 699 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 TRPC1P48995 793 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 FBXW4P57775 412 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 TMEM64Q6YI46 380 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 COMMD6Q7Z4G1 85 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 PACS2Q86VP3 889 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 ULK2Q8IYT8 1036 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 ZNF615Q8N8J6 731 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 C17orf47Q8NEP4 570 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 TRPC4APQ8TEL6 797 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 SELENOMQ8WWX9 145 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 RILPQ96NA2 401 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 BRF2Q9HAW0 419 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 NMRK1Q9NWW6 199 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 CFL2Q9Y281 166 aa19.18■□□□□ 0.66
SMPD1-204ENST00000530395 ANKHD1Q8IWZ3 2542 aaKnown RBP19.17■□□□□ 0.66
SMPD1-204ENST00000530395 WDR53Q7Z5U6 358 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-204ENST00000530395 TMEM200AQ86VY9 491 aa19.17■□□□□ 0.66
SMPD1-204ENST00000530395 VWA5B2Q8N398 1253 aa19.17■□□□□ 0.66
SMPD1-204ENST00000530395 SPPL2AQ8TCT8 520 aa19.17■□□□□ 0.66
SMPD1-204ENST00000530395 ZNF483Q8TF39 744 aaPredicted RBP19.17■□□□□ 0.66
SMPD1-204ENST00000530395 DCAKDQ8WVC6 231 aa19.17■□□□□ 0.66
SMPD1-204ENST00000530395 PSME2Q9UL46 239 aa19.17■□□□□ 0.66
SMPD1-204ENST00000530395 PCDHA9Q9Y5H5 950 aa19.17■□□□□ 0.66
SMPD1-204ENST00000530395 CDH16O75309 829 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 TRAPPC6AO75865 159 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 PDYNP01213 254 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 SNRPAP09012 282 aaKnown RBP19.16■□□□□ 0.66
SMPD1-204ENST00000530395 DUSP8Q13202 625 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 GLE1Q53GS7 698 aaKnown RBP19.16■□□□□ 0.66
SMPD1-204ENST00000530395 LGSNQ5TDP6 509 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 SLC48A1Q6P1K1 146 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 NOA1Q8NC60 698 aaKnown RBP19.16■□□□□ 0.66
SMPD1-204ENST00000530395 UHMK1Q8TAS1 419 aaKnown RBP19.16■□□□□ 0.66
SMPD1-204ENST00000530395 ZNF592Q92610 1267 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 ADIPOR1Q96A54 375 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 FAIM2Q9BWQ8 316 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 C1QTNF3Q9BXJ4 246 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 ANGPTL4Q9BY76 406 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 BRINP2Q9C0B6 783 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 FARSBQ9NSD9 589 aaKnown RBP19.16■□□□□ 0.66
SMPD1-204ENST00000530395 TRPS1Q9UHF7 1281 aa19.16■□□□□ 0.66
SMPD1-204ENST00000530395 EXOC1LA0A1B0GW35 172 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 HSPB2A8KAH6 182 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 A8MT66 165 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 ERAL1O75616 437 aaKnown RBP19.15■□□□□ 0.66
SMPD1-204ENST00000530395 ZWINTO95229 277 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 CTAGE8P0CG41 777 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 CSNK2A2P19784 350 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-204ENST00000530395 TAC1P20366 129 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 GPX3P22352 226 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 ABCD3P28288 659 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 CDH13P55290 713 aa19.15■□□□□ 0.66
SMPD1-204ENST00000530395 SF3B4Q15427 424 aaKnown RBP eCLIP19.15■□□□□ 0.66
SMPD1-204ENST00000530395 HSPB2Q16082 182 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms