RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 SPRED3Q2MJR0 410 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 HEPHL1Q6MZM0 1159 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 PODNL1Q6PEZ8 512 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 PLEKHM3Q6ZWE6 761 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 GALNT7Q86SF2 657 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 ST13P4Q8IZP2 240 aaPredicted RBP17.21■□□□□ 0.35
SSRP1-204ENST00000529002 OR1J4Q8NGS1 313 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 STARD4Q96DR4 205 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 PTCD3Q96EY7 689 aaKnown RBP17.21■□□□□ 0.35
SSRP1-204ENST00000529002 PHACTR1Q9C0D0 580 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 GALNT9Q9HCQ5 603 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 WWOXQ9NZC7 414 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 GPRC5BQ9NZH0 403 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 MAPRE3Q9UPY8 281 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 DTX4Q9Y2E6 619 aa17.21■□□□□ 0.35
SSRP1-204ENST00000529002 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.21■□□□□ 0.354e-10■■■■■ 27.2
SSRP1-204ENST00000529002 MSTNO14793 375 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 PLAUP00749 431 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 CT62P0C5K7 136 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 TCEA1P23193 301 aaKnown RBP17.2■□□□□ 0.34
SSRP1-204ENST00000529002 ATP5J2P56134 94 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 TAS2R39P59534 338 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 TNFRSF17Q02223 184 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 CHIT1Q13231 466 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 SETDB1Q15047 1291 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 TGFBIQ15582 683 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 BTLAQ7Z6A9 289 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 GRAMD2AQ8IUY3 354 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 NKAPQ8N5F7 415 aaKnown RBP17.2■□□□□ 0.34
SSRP1-204ENST00000529002 CNEP1R1Q8N9A8 125 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 SRFBP1Q8NEF9 429 aaKnown RBP17.2■□□□□ 0.34
SSRP1-204ENST00000529002 TMEM158Q8WZ71 300 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 WDR34Q96EX3 536 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 CFAP36Q96G28 342 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 VPS39Q96JC1 886 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 NODALQ96S42 347 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 EHD1Q9H4M9 534 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 SNX15Q9NRS6 342 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 FETUBQ9UGM5 382 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 ADGRE2Q9UHX3 823 aa17.2■□□□□ 0.34
SSRP1-204ENST00000529002 OR6C76A6NM76 312 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 CAPN14A8MX76 684 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 PLOD2O00469 737 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 SOX30O94993 753 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 PTGDSP41222 190 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 PCDH1Q08174 1060 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 NNATQ16517 81 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 KBTBD12Q3ZCT8 623 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 RNASEH2BQ5TBB1 312 aaKnown RBP17.19■□□□□ 0.34
SSRP1-204ENST00000529002 HLA-DQA1Q5Y7H0 255 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 OR4C11Q6IEV9 310 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 ADAMTSL2Q86TH1 951 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 GPR180Q86V85 440 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 PPIL6Q8IXY8 311 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 MEIOBQ8N635 442 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 OR14L1PQ8NHC6 308 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 TANKQ92844 425 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 ADIPOR1Q96A54 375 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 CTHRC1Q96CG8 243 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 UCN2Q96RP3 112 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 CAPS2Q9BXY5 557 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 METTL7AQ9H8H3 244 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 YAE1D1Q9NRH1 226 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 HEY2Q9UBP5 337 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 ALPK2Q86TB3 2170 aa17.19■□□□□ 0.34
SSRP1-204ENST00000529002 FAM95CA0A1B0GW59 222 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 GPR75O95800 540 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 ABCB1P08183 1280 aaPredicted RBP17.18■□□□□ 0.34
SSRP1-204ENST00000529002 UGT2B10P36537 528 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 LHX2P50458 406 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 SIRPAP78324 504 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 IRF8Q02556 426 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 GAB1Q13480 694 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 DDX39BQ13838 428 aaKnown RBP17.18■□□□□ 0.34
SSRP1-204ENST00000529002 TMEM171Q8WVE6 324 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 ANKRD7Q92527 254 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 TP53INP1Q96A56 240 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 PGM2Q96G03 612 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 MS4A14Q96JA4 679 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 SECISBP2Q96T21 854 aaKnown RBP17.18■□□□□ 0.34
SSRP1-204ENST00000529002 EFCAB11Q9BUY7 163 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 ACBD3Q9H3P7 528 aa17.18■□□□□ 0.34
SSRP1-204ENST00000529002 ZNF701Q9NV72 531 aaPredicted RBP17.18■□□□□ 0.34
SSRP1-204ENST00000529002 CORO1CQ9ULV4 474 aaPredicted RBP17.18■□□□□ 0.34
SSRP1-204ENST00000529002 PHF1O43189 567 aaPredicted RBP17.17■□□□□ 0.34
SSRP1-204ENST00000529002 ICOSLGO75144 302 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 STK16O75716 305 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 TTC4O95801 387 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 POU2F1P14859 743 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 PAX1P15863 534 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 CNTFP26441 200 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 ABCD3P28288 659 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 CLDN18P56856 261 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 VEZF1Q14119 521 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 PDK4Q16654 411 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 TMEM35AQ53FP2 167 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 KHDRBS2Q5VWX1 349 aaKnown RBP17.17■□□□□ 0.34
SSRP1-204ENST00000529002 CCDC137Q6PK04 289 aaKnown RBP17.17■□□□□ 0.34
SSRP1-204ENST00000529002 ENPP6Q6UWR7 440 aa17.17■□□□□ 0.34
SSRP1-204ENST00000529002 WDSUB1Q8N9V3 476 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms