RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ALPK1Q96QP1 1244 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 DOK1Q99704 481 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 TCEAL2Q9H3H9 227 aaPredicted RBP13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 DUSP21Q9H596 190 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 PLCXD1Q9NUJ7 323 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 GIN1Q9NXP7 522 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 POMT2Q9UKY4 750 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 CA14Q9ULX7 337 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 MGAT4BQ9UQ53 548 aa13.9□□□□□ -0.18
ECHDC1-220ENST00000528402 A0A1W2PR77 199 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 FAM170BA6NMN3 283 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 ADAP00813 363 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 H1F0P07305 194 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 NME1P15531 152 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 PORP16435 677 aaPredicted RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 IL7RP16871 459 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 ITIH1P19827 911 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 IFNA8P32881 189 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 YAP1P46937 504 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 MVKQ03426 396 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 RUNX2Q13950 521 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 LASP1Q14847 261 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 MAD2L1BPQ15013 274 aaPredicted RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 TCEA2Q15560 299 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 GPR19Q15760 415 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 SYPL1Q16563 259 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 DEFB134Q4QY38 66 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 RPS26P11Q5JNZ5 115 aaPredicted RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 DCST1Q5T197 706 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 PTCRAQ6ISU1 281 aaPredicted RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 TMEM107Q6UX40 140 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC36A4Q6YBV0 504 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 CLVS1Q8IUQ0 354 aaPredicted RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 SPEM1Q8N4L4 309 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 SVOPQ8N4V2 548 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 BPIFB6Q8NFQ5 453 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 GPR32P1Q8NGA4 272 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 OR13F1Q8NGS4 319 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 ADAMTS15Q8TE58 950 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 SLC6A18Q96N87 628 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 MS4A4EQ96PG1 132 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 OR7D2Q96RA2 312 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 CCDC3Q9BQI4 270 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 SYNPO2LQ9H987 977 aa13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 CACYBPQ9HB71 228 aaKnown RBP13.9□□□□□ -0.19
ECHDC1-220ENST00000528402 A0A087WV62 115 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 LILRA5A6NI73 299 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 TLR4O00206 839 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 P2RX6O15547 441 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 PRKRAO75569 313 aaKnown RBP13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 SEC14L2O76054 403 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 LGI1O95970 557 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 RECKO95980 971 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 C8orf89P0DMQ9 161 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 TNFRSF1BP20333 461 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 CBLP22681 906 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 MAN2A2P49641 1150 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 UBXN2BQ14CS0 331 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 NDUFA9Q16795 377 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 LAIR2Q6ISS4 152 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 TCTN3Q6NUS6 607 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 CDC73Q6P1J9 531 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 P3H2Q8IVL5 708 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 OR2L13Q8N349 312 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 CSNK1A1LQ8N752 337 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 OR9A2Q8NGT5 310 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 OR52J3Q8NH60 311 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 KLHL6Q8WZ60 621 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 MPP4Q96JB8 637 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 FCRL4Q96PJ5 515 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 BCL7BQ9BQE9 202 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 LRRC61Q9BV99 259 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 NMNAT1Q9HAN9 279 aaPredicted RBP13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 DOLKQ9UPQ8 538 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 IFT52Q9Y366 437 aa13.89□□□□□ -0.19
ECHDC1-220ENST00000528402 LOC105369274A0A096LPK9 316 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 LOC102723532A0A0G2JNH3 316 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 A0A1W2PRQ8 180 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 PRAMEF27A3QJZ7 478 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 WASHC1A8K0Z3 465 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 GALR3O60755 368 aaPredicted RBP13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 CYP4B1P13584 511 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 CPMP14384 443 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 MC3RP41968 323 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 HPCAP84074 193 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 COX10Q12887 443 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 DGCR6Q14129 220 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 GAS6Q14393 721 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 FAM214AQ32MH5 1076 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 GPAT3Q53EU6 434 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 ZNF542PQ5EBM4 170 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 FRMPD2BQ6IN97 320 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 HEPHL1Q6MZM0 1159 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 DHRS4L2Q6PKH6 230 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 B3GNT8Q7Z7M8 397 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 OR4N4Q8N0Y3 316 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 OR5D16Q8NGK9 328 aa13.88□□□□□ -0.19
ECHDC1-220ENST00000528402 ZCCHC10Q8TBK6 192 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms