RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 C6orf163Q5TEZ5 329 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 ADGRD1Q6QNK2 874 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TIFABQ6ZNK6 161 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 NCCRP1Q6ZVX7 275 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-212ENST00000527887 GALNT12Q8IXK2 581 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF295-AS1Q8N0V1 137 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 MARVELD2Q8N4S9 558 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 C17orf47Q8NEP4 570 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 OR7G1Q8NGA0 311 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 OR5M3Q8NGP4 307 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 OR2W6PQ8NHA6 318 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 DCAKDQ8WVC6 231 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TLCD1Q96CP7 247 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 LURAP1Q96LR2 239 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 CDK15Q96Q40 435 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 LDAHQ9H6V9 325 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 ZBTB26Q9HCK0 441 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 KCNJ16Q9NPI9 418 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TUBA8Q9NY65 449 aaPredicted RBP13.08□□□□□ -0.32
CAPN1-212ENST00000527887 B4GALT7Q9UBV7 327 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 CFL2Q9Y281 166 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 PDZD2O15018 2839 aa13.08□□□□□ -0.32
CAPN1-212ENST00000527887 TRGV5A0A0B4J1U4 118 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 C2orf92A0A1B0GVN3 265 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 C1orf226A1L170 272 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 GLOD5A6NK44 160 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 G3V3Y1 287 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 PRKRAO75569 313 aaKnown RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 SNRPB2P08579 225 aaKnown RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 PORP16435 677 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 TAC1P20366 129 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 PIGAP37287 484 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 DNASE1L1P49184 302 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 XKP51811 444 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 NRG3P56975 720 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 TRA2BP62995 288 aaKnown RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 PMPCAQ10713 525 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 HLA-DQA1Q5Y7H0 255 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 B3GNT6Q6ZMB0 384 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 LRRC25Q8N386 305 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF441Q8N8Z8 693 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 OR4F6Q8NGB9 312 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF483Q8TF39 744 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 CHTF18Q8WVB6 975 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 ARL8AQ96BM9 186 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 GAL3ST4Q96RP7 486 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 PNPLA3Q9NST1 481 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 TRPS1Q9UHF7 1281 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 ACAD8Q9UKU7 415 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 RNF6Q9Y252 685 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 CHCHD2Q9Y6H1 151 aaPredicted RBP13.07□□□□□ -0.32
CAPN1-212ENST00000527887 GTF3C1Q12789 2109 aa13.07□□□□□ -0.32
CAPN1-212ENST00000527887 ATP6AP2A0A1C7CYW4 349 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 WASHC1A8K0Z3 465 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 RRP9O43818 475 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 ATP6AP2O75787 350 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 SNX4O95219 450 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 GBAP04062 536 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 HSD3B1P14060 373 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 NAGAP17050 411 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 IGFBP2P18065 325 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 HSD3B2P26439 372 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 MAPK12P53778 367 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 RPS6KA2Q15349 733 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 TTMPQ5BVD1 217 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 UBAP2Q5T6F2 1119 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 TMEM198Q66K66 360 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF585AQ6P3V2 769 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 MEX3BQ6ZN04 569 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 TMEM151AQ8N4L1 468 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 FAM13CQ8NE31 585 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 SELENOMQ8WWX9 145 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 SREK1Q8WXA9 508 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 NSUN5Q96P11 429 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 DOHHQ9BU89 302 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 FAIM2Q9BWQ8 316 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 MRPL1Q9BYD6 325 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 OR10A5Q9H207 317 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF703Q9H7S9 590 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 SEMA4BQ9NPR2 832 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 TEX10Q9NXF1 929 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 PSMC3IPQ9P2W1 217 aaPredicted RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 CNOT11Q9UKZ1 510 aaKnown RBP13.06□□□□□ -0.32
CAPN1-212ENST00000527887 SLC12A4Q9UP95 1085 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 STK38LQ9Y2H1 464 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 PCDHA9Q9Y5H5 950 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 NPFFR2Q9Y5X5 522 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 PKDREJQ9NTG1 2253 aa13.06□□□□□ -0.32
CAPN1-212ENST00000527887 TLDC2A0PJX2 215 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 A8MT66 165 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 KRT6AP02538 564 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 CLPSP04118 112 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 KRT6BP04259 564 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 ATP1B1P05026 303 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 CPMP14384 443 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 GCAP28676 217 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 KRT6CP48668 564 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms