RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 FAM166AQ6J272 317 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 DNAJC14Q6Y2X3 702 aaPredicted RBP12.12□□□□□ -0.47
SSRP1-203ENST00000526696 RNF111Q6ZNA4 994 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 UBE3DQ7Z6J8 389 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 DTX2Q86UW9 622 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 THOC6Q86W42 341 aaKnown RBP12.12□□□□□ -0.47
SSRP1-203ENST00000526696 IFNEQ86WN2 208 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 PRR22Q8IZ63 422 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 TAGAPQ8N103 731 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 ZNF525Q8N782 197 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 C3orf56Q8N813 242 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 WDSUB1Q8N9V3 476 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 KBTBD8Q8NFY9 601 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 FBXL8Q96CD0 374 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 MSI2Q96DH6 328 aaKnown RBP12.12□□□□□ -0.47
SSRP1-203ENST00000526696 REXO4Q9GZR2 422 aaKnown RBP12.12□□□□□ -0.47
SSRP1-203ENST00000526696 RNF122Q9H9V4 155 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 LYRM4Q9HD34 91 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 SOX13Q9UN79 622 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 PROCRQ9UNN8 238 aa12.12□□□□□ -0.47
SSRP1-203ENST00000526696 LOC100289279A0A1B0GTE1 492 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 H0YC42 278 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 CDC7O00311 574 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 GUCA1CO95843 209 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 ZSCAN5DPP0CG00 497 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 SLC25A16P16260 332 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 GCKP35557 465 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 NPY2RP49146 381 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 TPD52P55327 224 aaPredicted RBP12.11□□□□□ -0.47
SSRP1-203ENST00000526696 PCDH1Q08174 1060 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 ZNF267Q14586 743 aaPredicted RBP12.11□□□□□ -0.47
SSRP1-203ENST00000526696 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 ALKBH2Q6NS38 261 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 CLEC2AQ6UVW9 174 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 NODALQ96S42 347 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 GRIP2Q9C0E4 1043 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 ACTR6Q9GZN1 396 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 RYDENQ9NUL5 291 aaKnown RBP12.11□□□□□ -0.47
SSRP1-203ENST00000526696 BFARQ9NZS9 450 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 SLC22A14Q9Y267 594 aa12.11□□□□□ -0.47
SSRP1-203ENST00000526696 A0A088AWK7 358 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 IQANK1A0A1B0GTG1 560 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 CAPN14A8MX76 684 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 B4DXG7 233 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 KIAA0513O60268 411 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 ABCB1P08183 1280 aaPredicted RBP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 HIST1H2AGP0C0S8 130 aaPredicted RBP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 HIST1H2ADP20671 130 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 ZNF10P21506 573 aaPredicted RBP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 STIP1P31948 543 aaKnown RBP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 SLC1A2P43004 574 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 GZMKP49863 264 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 LSM11P83369 360 aaKnown RBP eCLIP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 RCN2Q14257 317 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 NRF1Q16656 503 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 TRIM40Q6P9F5 258 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 PAQR3Q6TCH7 311 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 BBOF1Q8ND07 529 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 SEMA6DQ8NFY4 1073 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 ADIPOR1Q96A54 375 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 HIST1H2AHQ96KK5 128 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 F2RL3Q96RI0 385 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 HIST1H2AJQ99878 128 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 H2AFJQ9BTM1 129 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 TRIM2Q9C040 744 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 CCDC68Q9H2F9 335 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 TAS2R10Q9NYW0 307 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 IFNKQ9P0W0 207 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 PTBP2Q9UKA9 531 aaKnown RBP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 IKZF3Q9UKT9 509 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 EXO1Q9UQ84 846 aaKnown RBP12.1□□□□□ -0.47
SSRP1-203ENST00000526696 DYRK1BQ9Y463 629 aa12.1□□□□□ -0.47
SSRP1-203ENST00000526696 SYCE3A1L190 88 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 GRID2IPA4D2P6 1211 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 GOLGA6L9A6NEM1 432 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 OR6C76A6NM76 312 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 WASHC1A8K0Z3 465 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 RTCAO00442 366 aaKnown RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 ICOSLGO75144 302 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 PRKRAO75569 313 aaKnown RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 CLEC3AO75596 197 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 HAUS5O94927 633 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 HNF1AP20823 631 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 USF1P22415 310 aaPredicted RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 TCEA1P23193 301 aaKnown RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 SSTR4P31391 388 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 SUCLG1P53597 346 aaKnown RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 PGGT1BP53609 377 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 AP1S2P56377 157 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 DSCR9P59020 149 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 B3GALT5-AS1P59052 145 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 SLBPQ14493 270 aaKnown RBP eCLIP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 SETDB1Q15047 1291 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 PDCD2Q16342 344 aaPredicted RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 SPRED3Q2MJR0 410 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 CR1LQ2VPA4 569 aa12.09□□□□□ -0.47
SSRP1-203ENST00000526696 CTU2Q2VPK5 515 aaKnown RBP12.09□□□□□ -0.47
SSRP1-203ENST00000526696 SEZ6L2Q6UXD5 910 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms