RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 KRT34O76011 436 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 CBX7O95931 251 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 CLPSP04118 112 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 ITGAMP11215 1152 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 COX4I1P13073 169 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 PRKAG1P54619 331 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 TMPRSS3P57727 454 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 CXADRP78310 365 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 Q0VFX4 171 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 MAP4K2Q12851 820 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 DUSP8Q13202 625 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 GAB1Q13480 694 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 TLR1Q15399 786 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 MAPKAPK3Q16644 382 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 SPDYE7PQ495Y7 208 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 GTDC1Q4AE62 458 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 C6orf10Q5SRN2 563 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 RNF111Q6ZNA4 994 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 ANKS4BQ8N8V4 417 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 KDF1Q8NAX2 398 aaPredicted RBP12.77□□□□□ -0.37
CD44-224ENST00000526669 MORN4Q8NDC4 146 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 VPS37AQ8NEZ2 397 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 B3GNT7Q8NFL0 401 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 OR52R1Q8NGF1 315 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 ZNF675Q8TD23 568 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 THAP3Q8WTV1 239 aaPredicted RBP12.77□□□□□ -0.37
CD44-224ENST00000526669 ELP4Q96EB1 424 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 SENP5Q96HI0 755 aaPredicted RBP12.77□□□□□ -0.37
CD44-224ENST00000526669 FBXL20Q96IG2 436 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 VPS50Q96JG6 964 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 ART5Q96L15 291 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 IMMP1LQ96LU5 166 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 CCDC115Q96NT0 180 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 IP6K3Q96PC2 410 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 LRRC37BQ96QE4 947 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 EQTNQ9NQ60 294 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 BTNL2Q9UIR0 455 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 ZNF223Q9UK11 482 aaPredicted RBP12.77□□□□□ -0.37
CD44-224ENST00000526669 ZMIZ1Q9ULJ6 1067 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 PCDHGB4Q9UN71 923 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 ERVK-11Q9UQG0 969 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 PCNX3Q9H6A9 2034 aa12.77□□□□□ -0.37
CD44-224ENST00000526669 A0A087WV48 116 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 A0A1W2PQ72 361 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 A6NL46 340 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 RFXANKO14593 260 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 ANGPT2O15123 496 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 DNAJB5O75953 348 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 ANP32DO95626 131 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 C1QCP02747 245 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 S1PR1P21453 382 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 GALNSP34059 522 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 ST13P50502 369 aaKnown RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 GPR143P51810 404 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 RAPSNQ13702 412 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 CYLC2Q14093 348 aaPredicted RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 MLC1Q15049 377 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 TERF2Q15554 542 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 MAPRE2Q15555 327 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 MMEL1Q495T6 779 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 DCAF10Q5QP82 559 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 FHL5Q5TD97 284 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 REP15Q6BDI9 236 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 WDR53Q7Z5U6 358 aaPredicted RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 RETREG3Q86VR2 466 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 FITM2Q8N6M3 262 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 APCDD1LQ8NCL9 501 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 C7orf57Q8NEG2 295 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 NUP43Q8NFH3 380 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 OR1N1Q8NGS0 311 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 FBXO30Q8TB52 745 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 THAP4Q8WY91 577 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 GTF2H4Q92759 462 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 FAM120BQ96EK7 910 aaKnown RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 VMP1Q96GC9 406 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 THOC3Q96J01 351 aaKnown RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 ITCHQ96J02 903 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 CNTNAP3BQ96NU0 1288 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 PANX1Q96RD7 426 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 NPAS2Q99743 824 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 CNTNAP3Q9BZ76 1288 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 TRIM4Q9C037 500 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 OR10A5Q9H207 317 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 RMND5AQ9H871 391 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 LIN28AQ9H9Z2 209 aaKnown RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 IL1RL2Q9HB29 575 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 SERHLQ9NQF3 203 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 SLC6A13Q9NSD5 602 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 ARL8BQ9NVJ2 186 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 DDX18Q9NVP1 670 aaKnown RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 TAS2R9Q9NYW1 312 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 COPS7AQ9UBW8 275 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 LEF1Q9UJU2 399 aaPredicted RBP12.76□□□□□ -0.37
CD44-224ENST00000526669 DTX4Q9Y2E6 619 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 PKD1L2Q7Z442 2459 aa12.76□□□□□ -0.37
CD44-224ENST00000526669 USP24Q9UPU5 2620 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 DSPP15924 2871 aaKnown RBP12.75□□□□□ -0.37
CD44-224ENST00000526669 RNF103-CHMP3A0A140T963 221 aa12.75□□□□□ -0.37
CD44-224ENST00000526669 A0A1W2PP18 115 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms