RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 CCAR2Q8N163 923 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 CCDC197Q8NCU1 140 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 FBXO25Q8TCJ0 367 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 SAP25Q8TEE9 199 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 HEXDCQ8WVB3 486 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 C9orf85Q96MD7 179 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 RAB3IPQ96QF0 476 aaPredicted RBP1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 TXLNGYQ9BZA5 131 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 MINDY3Q9H8M7 445 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 PLEK2Q9NYT0 353 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 CIDEBQ9UHD4 219 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 ANAPC5Q9UJX4 755 aa1.31□□□□□ -2.2
ECHDC1-219ENST00000526299 GGPS1O95749 300 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 CCDC175P0C221 793 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 AKR1B1P15121 316 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 TBPP20226 339 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 GLRA1P23415 457 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 UCP2P55851 309 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 PAX5Q02548 391 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 TAF3Q5VWG9 929 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 TMED8Q6PL24 325 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 PET117Q6UWS5 81 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 CHST3Q7LGC8 479 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 PRSS48Q7RTY5 328 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 CCDC186Q7Z3E2 898 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 THNSL1Q8IYQ7 743 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 LSMEM1Q8N8F7 131 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 CCDC191Q8NCU4 936 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 OR10H4Q8NGA5 316 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 GBP5Q96PP8 586 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 ZNF670Q9BS34 389 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 EDEM3Q9BZQ6 932 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 TRIM9Q9C026 710 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 CXXC4Q9H2H0 198 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 Q9H3A6 140 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 ZWILCHQ9H900 591 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 Q9HAA7 133 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 NFKBIL1Q9UBC1 381 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 LEF1Q9UJU2 399 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 RNF115Q9Y4L5 304 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 OR1A2Q9Y585 309 aa1.3□□□□□ -2.2
ECHDC1-219ENST00000526299 TSPY2A6NKD2 308 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 USP27XA6NNY8 438 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 C17orf51A8MQB3 221 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 WWP2O00308 870 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 OR7A17O14581 309 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 ABCD4O14678 606 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 WDR46O15213 610 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 CT45A10P0DMU9 189 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 IL11P20809 199 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 CTNNA1P35221 906 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 PTENP60484 403 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 SCN1BQ07699 218 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 AIMP1Q12904 312 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 GIT2Q14161 759 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 P2RY14Q15391 338 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 DCAF4L1Q3SXM0 396 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 SEL1L2Q5TEA6 688 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 SNRNP48Q6IEG0 339 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 ZFP2Q6ZN57 461 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 MOB2Q70IA6 237 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 TRPM8Q7Z2W7 1104 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 CREBRFQ8IUR6 639 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 RNF182Q8N6D2 247 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 DEDD2Q8WXF8 326 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 MRPS27Q92552 414 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 FAM162AQ96A26 154 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 RMDN1Q96DB5 314 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 PGAP3Q96FM1 320 aaPredicted RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 SLC25A23Q9BV35 468 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 ANKEF1Q9NU02 776 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 STOX2Q9P2F5 926 aaPredicted RBP1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 PHF11Q9UIL8 331 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 LIPGQ9Y5X9 500 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 PFASO15067 1338 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 FGD5Q6ZNL6 1462 aa1.29□□□□□ -2.2
ECHDC1-219ENST00000526299 A0A1W2PRQ8 180 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 ARHGEF37A1IGU5 675 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 SLC17A2O00624 439 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 DLGAP1O14490 977 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 LCMT2O60294 686 aaKnown RBP1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 NOL4O94818 638 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 UFL1O94874 794 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 RPN1P04843 607 aaKnown RBP1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 SCG2P13521 617 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 UCP1P25874 307 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 CCR4P51679 360 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 SUCLG1P53597 346 aaKnown RBP1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 RAD23AP54725 363 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 HERVK_113P61574 105 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 MOBPQ13875 183 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 PDE7AQ13946 482 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 COG2Q14746 738 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 KYNUQ16719 465 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 ZNF630Q2M218 657 aaPredicted RBP1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 TWISTNBQ3B726 338 aaPredicted RBP1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 KRBOX4Q5JUW0 171 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 PM20D1Q6GTS8 502 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 C11orf88Q6PI97 169 aa1.28□□□□□ -2.2
ECHDC1-219ENST00000526299 ERN2Q76MJ5 926 aaKnown RBP1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms