RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 DDX5P17844 614 aaKnown RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 NTSP30990 170 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 SSTR4P31391 388 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 PTGER1P34995 402 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 IDH3AP50213 366 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 NCBP2P52298 156 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 AQP5P55064 265 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 SLC37A1P57057 533 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 MLF1P58340 268 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 RNF4P78317 190 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 LSM12Q3MHD2 195 aaKnown RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 TRMT12Q53H54 448 aaKnown RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF628Q5EBL2 1059 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 C6orf163Q5TEZ5 329 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 GKAP1Q5VSY0 366 aaPredicted RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 C6orf89Q6UWU4 347 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 VWA5B2Q8N398 1253 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF615Q8N8J6 731 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 OR7G1Q8NGA0 311 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 OR7A2PQ8NGA2 310 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 OR5L2Q8NGL0 311 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 OR9A2Q8NGT5 310 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 THAP3Q8WTV1 239 aaPredicted RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 NUDT8Q8WV74 236 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 TM9SF4Q92544 642 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 HAS2Q92819 552 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 CIDECQ96AQ7 238 aaPredicted RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 COQ8BQ96D53 544 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 AMDHD1Q96NU7 426 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 PRPF18Q99633 342 aaKnown RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 BRINP2Q9C0B6 783 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 GLIPR2Q9H4G4 154 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 EPS8L2Q9H6S3 715 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 SLAMF7Q9NQ25 335 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.01□□□□□ -0.49
SMPD1-202ENST00000526280 AIG1Q9NVV5 245 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 MAPRE3Q9UPY8 281 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 GPR45Q9Y5Y3 372 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 CPAMD8Q8IZJ3 1885 aa12.01□□□□□ -0.49
SMPD1-202ENST00000526280 OR6C76A6NM76 312 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 DPM1O60762 260 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 WDPCPO95876 746 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 PRB1P04280 392 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 VIMP08670 466 aaKnown RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 LAMP1P11279 417 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 FRKP42685 505 aaPredicted RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 MRPS35P82673 323 aaKnown RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 CPTPQ5TA50 214 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 RNF111Q6ZNA4 994 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 ACAD11Q709F0 780 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 CAMKMTQ7Z624 323 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 PIGWQ7Z7B1 504 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 C9orf40Q8IXQ3 194 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 BEST3Q8N1M1 668 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 ZADH2Q8N4Q0 377 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 NATD1Q8N6N6 113 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 RBMXL3Q8N7X1 1067 aaKnown RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 NUBPLQ8TB37 319 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 STON2Q8WXE9 905 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 KAT2AQ92830 837 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 ZBED6CLQ96FA7 236 aaPredicted RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 EBF4Q9BQW3 602 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 CCDC28BQ9BUN5 200 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 DPY30Q9C005 99 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 RNF32Q9H0A6 362 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 OR10A5Q9H207 317 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 LIN28AQ9H9Z2 209 aaKnown RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 TCF7L2Q9NQB0 619 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 ACSS1Q9NUB1 689 aaPredicted RBP12□□□□□ -0.49
SMPD1-202ENST00000526280 ATAD3AQ9NVI7 634 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 PLA2G3Q9NZ20 509 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 MYOTQ9UBF9 498 aa12□□□□□ -0.49
SMPD1-202ENST00000526280 COL6A6A6NMZ7 2263 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 EIF4E1BA6NMX2 242 aaKnown RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 PLOD2O00469 737 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 CDK2AP1O14519 115 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 UBDO15205 165 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 PLOD3O60568 738 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 BCAS2O75934 225 aaPredicted RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 SLITRK5O94991 958 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 CBX7O95931 251 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 IDO1P14902 403 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 CD97P48960 835 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 DUSP8Q13202 625 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 EXOSC7Q15024 291 aaKnown RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 GSTA3Q16772 222 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 FHL5Q5TD97 284 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 TMEM198Q66K66 360 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 C16orf47Q6ZP98 133 aaPredicted RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 SLC29A4Q7RTT9 530 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 ZNF551Q7Z340 670 aaPredicted RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 YTHDF3Q7Z739 585 aaKnown RBP11.99□□□□□ -0.49
SMPD1-202ENST00000526280 CCDC197Q8NCU1 140 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 SIMC1Q8NDZ2 872 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 OR7G2Q8NG99 324 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 RFWD2Q8NHY2 731 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 ZFP28Q8NHY6 868 aa11.99□□□□□ -0.49
SMPD1-202ENST00000526280 TESCQ96BS2 214 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms