RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 NR2F6P10588 404 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 PTPN6P29350 595 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 GALNSP34059 522 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
CSTF3-206ENST00000524827 HLA-DQA1Q5Y7H0 255 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 TIGD3Q6B0B8 471 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 GRHL2Q6ISB3 625 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 YRDCQ86U90 279 aaKnown RBP12.61□□□□□ -0.39
CSTF3-206ENST00000524827 PRR22Q8IZ63 422 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 LRRC75A-AS1Q8N1F1 130 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 FAM83FQ8NEG4 500 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-206ENST00000524827 HUS1BQ8NHY5 278 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 ZPLD1Q8TCW7 415 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 NTNG2Q96CW9 530 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 TSPAN17Q96FV3 270 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 Q96MF0 132 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 ZFP3Q96NJ6 502 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 TUBA1CQ9BQE3 449 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 CENPKQ9BS16 269 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 ZNF717Q9BY31 904 aaPredicted RBP12.61□□□□□ -0.39
CSTF3-206ENST00000524827 SMYD2Q9NRG4 433 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 FETUBQ9UGM5 382 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 RNF112Q9ULX5 631 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 EIF3LQ9Y262 564 aaKnown RBP12.61□□□□□ -0.39
CSTF3-206ENST00000524827 ASB4Q9Y574 426 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 MED12LQ86YW9 2145 aa12.61□□□□□ -0.39
CSTF3-206ENST00000524827 A0A1W2PR48 441 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 A0A1W2PS29 197 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 CES2O00748 559 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 CASKO14936 926 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 TMPRSS11DO60235 418 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 EEDO75530 441 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 ACTL6AO96019 429 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 SLC35E2BP0CK96 405 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 SLC35E2P0CK97 266 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 NRG3P56975 720 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 RPP38P78345 283 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 PCDH1Q08174 1060 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 SETDB1Q15047 1291 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 MRM1Q6IN84 353 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 PLXDC2Q6UX71 529 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 CAPN12Q6ZSI9 719 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 LRRC8AQ8IWT6 810 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 GCNT2Q8N0V5 402 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 OR1J4Q8NGS1 313 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 SLC44A1Q8WWI5 657 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 ADIPOR1Q96A54 375 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 INTS12Q96CB8 462 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 MTERF1Q99551 399 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 PIP5K1AQ99755 562 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 TM9SF2Q99805 663 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 CXorf21Q9HAI6 301 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 LYARQ9NX58 379 aaKnown RBP12.6□□□□□ -0.39
CSTF3-206ENST00000524827 OPTCQ9UBM4 332 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 ADGRE2Q9UHX3 823 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 TESMINQ9Y4I5 508 aa12.6□□□□□ -0.39
CSTF3-206ENST00000524827 A0A0A6YYD5 115 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 H0Y3Z8 333 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 K7EPI3 171 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 SIAH2O43255 324 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 RCBTB2O95199 551 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 AIFM1O95831 613 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 CT62P0C5K7 136 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 CPN1P15169 458 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 STMN1P16949 149 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 GCKP35557 465 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 GMPRP36959 345 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 PIK3CBP42338 1070 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 RPS13P62277 151 aaKnown RBP12.59□□□□□ -0.39
CSTF3-206ENST00000524827 FUT7Q11130 342 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 ILF2Q12905 390 aaKnown RBP12.59□□□□□ -0.39
CSTF3-206ENST00000524827 ANGPTL8Q6UXH0 198 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 YTHDF3Q7Z739 585 aaKnown RBP12.59□□□□□ -0.39
CSTF3-206ENST00000524827 ADGRE4PQ86SQ3 457 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 GALNT12Q8IXK2 581 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 SLC35F6Q8N357 371 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 ZNF615Q8N8J6 731 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 LRRN4CLQ8ND94 238 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 SIMC1Q8NDZ2 872 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 UBTD2Q8WUN7 234 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 UCN3Q969E3 161 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 PIGTQ969N2 578 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 UBXN10Q96LJ8 280 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 GPR22Q99680 433 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 BDH2Q9BUT1 245 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 REPIN1Q9BWE0 567 aaKnown RBP12.59□□□□□ -0.39
CSTF3-206ENST00000524827 PIGMQ9H3S5 423 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 ALG9Q9H6U8 611 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 METTL7AQ9H8H3 244 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 WDR41Q9HAD4 459 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 NUDT4Q9NZJ9 180 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 C6orf203Q9P0P8 240 aaPredicted RBP12.59□□□□□ -0.39
CSTF3-206ENST00000524827 NDRG3Q9UGV2 375 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 SNX12Q9UMY4 172 aa12.59□□□□□ -0.39
CSTF3-206ENST00000524827 TRIM64A6NGJ6 449 aa12.58□□□□□ -0.4
CSTF3-206ENST00000524827 TRIM64BA6NI03 449 aa12.58□□□□□ -0.4
CSTF3-206ENST00000524827 CXorf49A8MYA2 514 aaPredicted RBP12.58□□□□□ -0.4
CSTF3-206ENST00000524827 SUPT3HB4E1H0 165 aa12.58□□□□□ -0.4
CSTF3-206ENST00000524827 INAFM1C9JVW0 142 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms