RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 PORP16435 677 aaPredicted RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 DNAJA1P31689 397 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 GCKP35557 465 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 GMPRP36959 345 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 ARL1P40616 181 aaPredicted RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 MASP1P48740 699 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 SERPINB9P50453 376 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 ASCL1P50553 236 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 CDK9P50750 372 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 DLX5P56178 289 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 DCAF7P61962 342 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 ETF1P62495 437 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 IRF9Q00978 393 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 CKAP4Q07065 602 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 SNTA1Q13424 505 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 GGTA1PQ4G0N0 100 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 CCNYL2Q5T2Q4 361 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 TTC19Q6DKK2 380 aaPredicted RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 VASNQ6EMK4 673 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 KIF18BQ86Y91 864 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 RELL1Q8IUW5 271 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 LIX1LQ8IVB5 337 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 ZNF615Q8N8J6 731 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 FAM222BQ8WU58 562 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 RNASE6Q93091 150 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 ADIPOR1Q96A54 375 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 HSPBAP1Q96EW2 488 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 TMEM41AQ96HV5 264 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 RILPQ96NA2 401 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 TIMP4Q99727 224 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 POLDIP3Q9BY77 421 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 FUT8Q9BYC5 575 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 PRDM14Q9GZV8 571 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 CXXC4Q9H2H0 198 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 SLC6A15Q9H2J7 730 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 UBQLN3Q9H347 655 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 ACSS3Q9H6R3 686 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 NOL11Q9H8H0 719 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 CALHM2Q9HA72 323 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 CPSF2Q9P2I0 782 aaKnown RBP10.86□□□□□ -0.67
SPARC-206ENST00000524277 FETUBQ9UGM5 382 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 PYCARDQ9ULZ3 195 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 ITPR3Q14573 2671 aa10.86□□□□□ -0.67
SPARC-206ENST00000524277 NINQ8N4C6 2090 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 C1orf226A1L170 272 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 CD8B2A6NJW9 211 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 PGRMC2O15173 223 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 ACOX3O15254 700 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 PRKRAO75569 313 aaKnown RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 TRAPPC6AO75865 159 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 IL18BPO95998 194 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 ALDOAP04075 364 aaKnown RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 KLK1P06870 262 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 RHOXF2BP0C7M4 288 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 CPMP14384 443 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 CNTFP26441 200 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 SSTR4P31391 388 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 OPRM1P35372 400 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 DEKP35659 375 aaKnown RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 CASP3P42574 277 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 NEK2P51955 445 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 TRA2BP62995 288 aaKnown RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 PSPHP78330 225 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 CRYZQ08257 329 aaKnown RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 MAP4K2Q12851 820 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 UAP1Q16222 522 aaPredicted RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 KRTAP21-3Q3LHN1 58 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 ACSF3Q4G176 576 aaPredicted RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 FLYWCH1Q4VC44 716 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 TECRLQ5HYJ1 363 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 NSUN5P2Q63ZY6 315 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 SLC30A6Q6NXT4 461 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 SCIMPQ6UWF3 145 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 NUP54Q7Z3B4 507 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 MILR1Q7Z6M3 343 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 METTL4Q8N3J2 472 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 PTGR2Q8N8N7 351 aaPredicted RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 GOT1L1Q8NHS2 421 aaPredicted RBP10.85□□□□□ -0.67
SPARC-206ENST00000524277 ISL2Q96A47 359 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 VPS11Q9H270 941 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 ELOVL6Q9H5J4 265 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 BRF2Q9HAW0 419 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 RASSF1Q9NS23 344 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 C15orf41Q9Y2V0 281 aa10.85□□□□□ -0.67
SPARC-206ENST00000524277 LRRC14BA6NHZ5 514 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 WASHC1A8K0Z3 465 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 OR7A17O14581 309 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 PPM1BO75688 479 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 BCAS2O75934 225 aaPredicted RBP10.84□□□□□ -0.67
SPARC-206ENST00000524277 KRT38O76015 456 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 SIX3O95343 332 aaPredicted RBP10.84□□□□□ -0.67
SPARC-206ENST00000524277 ACSL3O95573 720 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 ACTL6AO96019 429 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 OTCP00480 354 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 ATP1B1P05026 303 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 INHBAP08476 426 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 CSNK2A2P19784 350 aaPredicted RBP10.84□□□□□ -0.67
SPARC-206ENST00000524277 NT5EP21589 574 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 BMP5P22003 454 aa10.84□□□□□ -0.67
SPARC-206ENST00000524277 UQCRC1P31930 480 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms