RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CLPTM1LQ96KA5 538 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PRRC1Q96M27 445 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 PGLYRP2Q96PD5 576 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 OR14A2Q96R54 314 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 LGMNQ99538 433 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CPNE1Q99829 537 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 SEMA3CQ99985 751 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 TTYH2Q9BSA4 534 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 INPP5KQ9BT40 448 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 TRMOQ9BU70 441 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 RSRP1Q9BUV0 290 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GGACTQ9BVM4 153 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 POLDIP3Q9BY77 421 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 EBF3Q9H4W6 596 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CHST11Q9NPF2 352 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 KRCC1Q9NPI7 259 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CATSPERZQ9NTU4 200 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 RBM12Q9NTZ6 932 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 EVA1BQ9NVM1 165 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 NLGN3Q9NZ94 848 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 LRFN1Q9P244 771 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MYEF2Q9P2K5 600 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 C3orf18Q9UK00 162 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ADAM30Q9UKF2 790 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ADAMTS6Q9UKP5 1117 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 NDRG2Q9UN36 371 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 CDC14AQ9UNH5 594 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF281Q9Y2X9 895 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MRPS18CQ9Y3D5 142 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 TIMM13Q9Y5L4 95 aaPredicted RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 HELZP42694 1942 aaKnown RBP7.16□□□□□ -1.26
HDAC3-216ENST00000523088 GREB1Q4ZG55 1949 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 MYH10P35580 1976 aa7.16□□□□□ -1.26
HDAC3-216ENST00000523088 ANAPC1Q9H1A4 1944 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 TBC1D3KA0A087X1G2 549 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 A0A1W2PRU2 124 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MEIOCA2RUB1 952 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 AGAP5A6NIR3 686 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 A8MU76 341 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 K7EP13 123 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SLC33A1O00400 549 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MID1O15344 667 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 CFLARO15519 480 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 WIPF1O43516 503 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PSTPIP1O43586 416 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 EIF3GO75821 320 aaKnown RBP eCLIP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SCO1O75880 301 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RAF1P04049 648 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 JUNP05412 331 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 NUDT17P0C025 328 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 IL7P13232 177 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ACPPP15309 386 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PAX1P15863 534 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF10P21506 573 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SDHBP21912 280 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ME2P23368 584 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 EEF1B2P24534 225 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 IGFBP6P24592 240 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PTPN3P26045 913 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 GABRR2P28476 465 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 GCH1P30793 250 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 GMPRP36959 345 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 AVPR1AP37288 418 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 KCNC1P48547 511 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SERPINB10P48595 397 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 NR0B1P51843 470 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 HERVK_113P63132 956 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 VLDLRP98155 873 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RGS1Q08116 209 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PDIA2Q13087 525 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 KLF1Q13351 362 aaPredicted RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 BTN1A1Q13410 526 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 GANABQ14697 944 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 TEAD2Q15562 447 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PSG3Q16557 428 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 GAB4Q2WGN9 574 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 KLHL22Q53GT1 634 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ACSBG2Q5FVE4 666 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ATAD3CQ5T2N8 411 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 C6orf52Q5T4I8 152 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ZNF470Q6ECI4 717 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 TANGO2Q6ICL3 276 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 MED27Q6P2C8 311 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 DCUN1D2Q6PH85 259 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 VSTM1Q6UX27 236 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RAD9BQ6WBX8 426 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 LIPIQ6XZB0 460 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SPNS3Q6ZMD2 512 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 DPY19L3Q6ZPD9 716 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 SLC35D2Q76EJ3 337 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RD3Q7Z3Z2 195 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 ANGPTL5Q86XS5 388 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 KLBQ86Z14 1044 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 TGIF2LXQ8IUE1 241 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 CMIPQ8IY22 773 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 PLD6Q8N2A8 252 aaKnown RBP7.15□□□□□ -1.26
HDAC3-216ENST00000523088 C1orf127Q8N9H9 656 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 RDH13Q8NBN7 331 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 DNAAF1Q8NEP3 725 aa7.15□□□□□ -1.26
HDAC3-216ENST00000523088 C1orf162Q8NEQ5 155 aaPredicted RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms