RNA–Protein interactions for RNA: ENST00000520947.1

PTPN12-214, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 5

Gene PTPN12, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-214ENST00000520947 PROS1P07225 676 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 APRTP07741 180 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 HCKP08631 526 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 ETS1P14921 441 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 GNSP15586 552 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 LMO2P25791 158 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 PRDX6P30041 224 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 PGFP49763 221 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 NDST1P52848 882 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 ATXN3P54252 364 aaPredicted RBP3.84□□□□□ -1.79
PTPN12-214ENST00000520947 BPIFB3P59826 476 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 CDKL1Q00532 357 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 FCHO2Q0JRZ9 810 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 GAMTQ14353 236 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 EMC2Q15006 297 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 CCL14Q16627 93 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 HKDC1Q2TB90 917 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 ZNF528Q3MIS6 628 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 DDI2Q5TDH0 399 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 RHBDD2Q6NTF9 364 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 TIPARPQ7Z3E1 657 aaKnown RBP3.84□□□□□ -1.79
PTPN12-214ENST00000520947 GPR142Q7Z601 462 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 MRPL43Q8N983 215 aaKnown RBP3.84□□□□□ -1.79
PTPN12-214ENST00000520947 FBXO25Q8TCJ0 367 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 TMEM45BQ96B21 275 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 HSD17B14Q9BPX1 270 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 CBWD1Q9BRT8 395 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 LRRCC1Q9C099 1032 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 DCTPP1Q9H773 170 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 HEXA-AS1Q9H8Q6 139 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 SP140LQ9H930 580 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 GNB4Q9HAV0 340 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 HOMER3Q9NSC5 361 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 EIF3KQ9UBQ5 218 aaKnown RBP3.84□□□□□ -1.79
PTPN12-214ENST00000520947 MGAT4AQ9UM21 535 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 SPATA2Q9UM82 520 aa3.84□□□□□ -1.79
PTPN12-214ENST00000520947 PIN4Q9Y237 131 aaKnown RBP3.84□□□□□ -1.79
PTPN12-214ENST00000520947 IGKV6D-41A0A0C4DH26 115 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 IGHV3-16A0A0C4DH30 117 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 SHISA9B4DS77 424 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 SEMA4FO95754 770 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 TGFAP01135 160 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 MAT2AP31153 395 aaKnown RBP3.83□□□□□ -1.8
PTPN12-214ENST00000520947 HSPA1LP34931 641 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 NPY2RP49146 381 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ACY1Q03154 408 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 TCHHL1Q5QJ38 904 aaPredicted RBP3.83□□□□□ -1.8
PTPN12-214ENST00000520947 LIPKQ5VXJ0 399 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ZNF841Q6ZN19 808 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ASRGL1Q7L266 308 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 HDDC3Q8N4P3 179 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 TEX9Q8N6V9 391 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 LRRC17Q8N6Y2 441 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 POM121L12Q8N7R1 296 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 SAMD12Q8N8I0 201 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 C4orf32Q8N8J7 132 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 C17orf47Q8NEP4 570 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 OR4Q3Q8NH05 313 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 TMEM37Q8WXS4 190 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 FTHL17Q9BXU8 183 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 NLNQ9BYT8 704 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 HSD3B7Q9H2F3 369 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ADNPQ9H2P0 1102 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 Q9HAA7 133 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 IL1RL2Q9HB29 575 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ZNF446Q9NWS9 450 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 TAS2R16Q9NYV7 291 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.83□□□□□ -1.8
PTPN12-214ENST00000520947 EPS15L1Q9UBC2 864 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 CLIP2Q9UDT6 1046 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 IKZF3Q9UKT9 509 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ZNF175Q9Y473 711 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ATG4BQ9Y4P1 393 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 CPQQ9Y646 472 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 ZMYM6O95789 1325 aa3.83□□□□□ -1.8
PTPN12-214ENST00000520947 BCLAF3A2AJT9 711 aaKnown RBP3.82□□□□□ -1.8
PTPN12-214ENST00000520947 ARPC1BO15143 372 aaKnown RBP3.82□□□□□ -1.8
PTPN12-214ENST00000520947 TXNL1O43396 289 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 IGHG3P01860 377 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 CYP11B1P15538 503 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 RPA1P27694 616 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 PTPN4P29074 926 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 BTG3Q14201 252 aaPredicted RBP3.82□□□□□ -1.8
PTPN12-214ENST00000520947 ZKSCAN8Q15776 578 aaPredicted RBP3.82□□□□□ -1.8
PTPN12-214ENST00000520947 TMEM44Q2T9K0 475 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 AGKQ53H12 422 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 FAM182AQ5T1J6 154 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 EMBQ6PCB8 327 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 TMEM26Q6ZUK4 368 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 SLC47A2Q86VL8 602 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 KDM8Q8N371 416 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 PHYHIPQ92561 330 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 TBC1D31Q96DN5 1066 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 SAMD8Q96LT4 415 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 FAM111AQ96PZ2 611 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 PUS3Q9BZE2 481 aaKnown RBP3.82□□□□□ -1.8
PTPN12-214ENST00000520947 C1orf21Q9H246 121 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 FAM120CQ9NX05 1096 aaKnown RBP3.82□□□□□ -1.8
PTPN12-214ENST00000520947 LHX3Q9UBR4 397 aa3.82□□□□□ -1.8
PTPN12-214ENST00000520947 MIOXQ9UGB7 285 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms