RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 ACTR6Q9GZN1 396 aa8.34□□□□□ -1.07
CSMD1-206ENST00000520002 MCCC2Q9HCC0 563 aa8.34□□□□□ -1.07
CSMD1-206ENST00000520002 CFHP08603 1231 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 HFE2Q6ZVN8 426 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 P4HA3Q7Z4N8 544 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 TMEM41AQ96HV5 264 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 SLC29A1Q99808 456 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 SUV39H2Q9H5I1 410 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 HRH3Q9Y5N1 445 aa8.34□□□□□ -1.08
CSMD1-206ENST00000520002 AGXTP21549 392 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PKLRP30613 574 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ACVRL1P37023 503 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 HCAR3P49019 387 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CRYZQ08257 329 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 BEX5Q5H9J7 111 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 RFPL4BQ6ZWI9 263 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 DNAJB8Q8NHS0 232 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SH3RF2Q8TEC5 729 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 HS3ST4Q9Y661 456 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SETD1AO15047 1707 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CAPN5O15484 640 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PDGFAP04085 211 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PTPN2P17706 415 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 GDF5P43026 501 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 TIGD5Q53EQ6 642 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 METTL2BQ6P1Q9 378 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 HMGN2P46Q86SG4 172 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 THOC6Q86W42 341 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ST8SIA4Q92187 359 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 FKBP10Q96AY3 582 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 C14orf79Q96F83 325 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 METTL2AQ96IZ6 378 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF514Q96K75 400 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CD180Q99467 661 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 MGLLQ99685 303 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 HDHD5Q9BXW7 423 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SMIM3Q9BZL3 60 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 KCTD3Q9Y597 815 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PIKFYVEQ9Y2I7 2098 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 C6orf47O95873 294 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 G6PDP11413 515 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 NIPAL4Q0D2K0 466 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 MBTPS1Q14703 1052 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 NKPD1Q17RQ9 610 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ATG9BQ674R7 924 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PARP16Q8N5Y8 322 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 EXOSC1Q9Y3B2 195 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 LSM5Q9Y4Y9 91 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PCDHB14Q9Y5E9 798 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 TRAPPC6AO75865 159 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 OAS1P00973 400 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ATP1B2P14415 290 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CDK6Q00534 326 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SGCBQ16585 318 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 DEFB115Q30KQ5 88 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 NATD1Q8N6N6 113 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ARNTL2Q8WYA1 636 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 FCRL5Q96RD9 977 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 DPH2Q9BQC3 489 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 NSUN3Q9H649 340 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 TMEM248Q9NWD8 314 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 TMEM181Q9P2C4 612 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SCML2Q9UQR0 700 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 RNF11Q9Y3C5 154 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 A0A1W2PRU2 124 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 PCSK2P16519 638 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 GM2AP17900 193 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 GINS1Q14691 196 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CHADLQ6NUI6 762 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 Q6ZNX1 250 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 Q6ZVU0 165 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CLDN19Q8N6F1 224 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 OR5T2Q8NGG2 359 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 BTBD1Q9H0C5 482 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 FBRSL1Q9HCM7 1045 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CREBZFQ9NS37 354 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 A0A1W2PP18 115 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 MAGEB4O15481 346 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SLC26A5P58743 744 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 FKBP1BP68106 108 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SLC25A11Q02978 314 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 C18orf63Q68DL7 685 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CORO6Q6QEF8 472 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 TTLL10Q6ZVT0 673 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 C2orf15Q8WU43 125 aaKnown RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 DUXAA6NLW8 204 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 NOGQ13253 232 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 BRAT1Q6PJG6 821 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 C7orf61Q8IZ16 206 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CCM2Q9BSQ5 444 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 TEX264Q9Y6I9 313 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SPTBN2O15020 2390 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 MCM3APO60318 1980 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 A0A1W2PPL8 197 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 ZNF701M0R085 212 aaPredicted RBP8.33□□□□□ -1.08
CSMD1-206ENST00000520002 M0R129 80 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 CYP17A1P05093 508 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 HTR1AP08908 422 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 HK3P52790 923 aa8.33□□□□□ -1.08
CSMD1-206ENST00000520002 SNTB2Q13425 540 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms