RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 ANKHQ9HCJ1 492 aa13.61□□□□□ -0.23
CLN8-204ENST00000519254 ADPRHL2Q9NX46 363 aa13.61□□□□□ -0.23
CLN8-204ENST00000519254 SMPD3Q9NY59 655 aaPredicted RBP13.61□□□□□ -0.23
CLN8-204ENST00000519254 A0A0A6YYC8 382 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 A6NHS1 94 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 I3L1I5 382 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 hCG_2039718K7EN88 272 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SGK494L7N484 410 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 HYAL3O43820 417 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 RFPL3O75679 317 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 MED26O95402 600 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SNAP29O95721 258 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ALPLP05186 524 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 FABP3P05413 133 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 C8orf89P0DMQ9 161 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 NR2F6P10588 404 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 PTGER1P34995 402 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 FEN1P39748 380 aaKnown RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 DCTP40126 519 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ALDH3A2P51648 485 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ITGA1P56199 1179 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 CLDN6P56747 220 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SELENOWP63302 87 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 MYBPC1Q00872 1141 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 MERTKQ12866 999 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 PPP1R8Q12972 351 aaKnown RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 DAG1Q14118 895 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 GRM7Q14831 915 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 MYBPC3Q14896 1274 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 CEBPEQ15744 281 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 NDUFA9Q16795 377 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SLC36A3Q495N2 470 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 CRB2Q5IJ48 1285 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 PRAMEF17Q5VTA0 474 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ASCL5Q7RTU5 278 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 PIWIL3Q7Z3Z3 882 aaKnown RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 ZDHHC13Q8IUH4 622 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 CCDC116Q8IYX3 515 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 HS3ST5Q8IZT8 346 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OR5T3Q8NGG3 340 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OR5K1Q8NHB7 308 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ZFP28Q8NHY6 868 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 TAMM41Q96BW9 452 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 TBC1D20Q96BZ9 403 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OR6C1Q96RD1 312 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 DOHHQ9BU89 302 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ADI1Q9BV57 179 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 A4GALTQ9NPC4 353 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SERTAD3Q9UJW9 196 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SLC22A7Q9Y694 548 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 M0QX08 132 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 HMGN4O00479 90 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 FOXD2O60548 495 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 GALR3O60755 368 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 RDH16O75452 317 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OPN1SWP03999 348 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 GNAO1P09471 354 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 CSNK2A2P19784 350 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 CSTF2P33240 577 aaKnown RBP eCLIP13.6□□□□□ -0.23
CLN8-204ENST00000519254 GPC1P35052 558 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 PDX1P52945 283 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 LIM2P55344 173 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 TNFRSF17Q02223 184 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 TP53BP2Q13625 1128 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ELOAQ14241 798 aaKnown RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 MAPK11Q15759 364 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OR2T5Q6IEZ7 315 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 RBM44Q6ZP01 1051 aaKnown RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 TSEN54Q7Z6J9 526 aaKnown RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 DEFB124Q8NES8 71 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 OR2T29Q8NH02 315 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SLC38A5Q8WUX1 472 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 RAB8BQ92930 207 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ZNF501Q96CX3 271 aaPredicted RBP13.6□□□□□ -0.23
CLN8-204ENST00000519254 OSBPL10Q9BXB5 764 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 SMURF2Q9HAU4 748 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 NDOR1Q9UHB4 597 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 PHF11Q9UIL8 331 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 DAPP1Q9UN19 280 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ENTPD4Q9Y227 616 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 ANGPT4Q9Y264 503 aa13.6□□□□□ -0.23
CLN8-204ENST00000519254 DPPA5A6NC42 116 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
CLN8-204ENST00000519254 DIRAS1O95057 198 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 HPRP00739 348 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 TFPTP0C1Z6 253 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 CPN2P22792 545 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 PPP2R2BQ00005 443 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 ACY1Q03154 408 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 TRIP6Q15654 476 aaKnown RBP13.59□□□□□ -0.23
CLN8-204ENST00000519254 ANKRD34AQ69YU3 496 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 REEP3Q6NUK4 255 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 ISLR2Q6UXK2 745 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 TMEM64Q6YI46 380 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 TTLL10Q6ZVT0 673 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 SLC30A8Q8IWU4 369 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 SHISA5Q8N114 240 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 ARHGEF39Q8N4T4 335 aa13.59□□□□□ -0.23
CLN8-204ENST00000519254 DHRSXQ8N5I4 330 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms