RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 GK5Q6ZS86 529 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CLYBLQ8N0X4 340 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 MMP21Q8N119 569 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 GHDCQ8N2G8 530 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CPSF7Q8N684 471 aaKnown RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 OR6Y1Q8NGX8 325 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 PAQR8Q8TEZ7 354 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 RELTQ969Z4 430 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 SPACA9Q96E40 222 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CNRIP1Q96F85 164 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF764Q96H86 408 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 ZIM3Q96PE6 472 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 PSMG3-AS1Q96PY0 264 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 GAL3ST4Q96RP7 486 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 FAM173AQ9BQD7 235 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 MECRQ9BV79 373 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 OR10A5Q9H207 317 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 SACM1LQ9NTJ5 587 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 C1orf109Q9NX04 203 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 MAT2BQ9NZL9 334 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF639Q9UID6 485 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 ERRFI1Q9UJM3 462 aaPredicted RBP11.81□□□□□ -0.52
CLCN3-210ENST00000515420 OSGIN2Q9Y236 505 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 TMED5Q9Y3A6 229 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 DNAJC15Q9Y5T4 150 aa11.81□□□□□ -0.52
CLCN3-210ENST00000515420 CAPN14A8MX76 684 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 BIRC5O15392 142 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ASNA1O43681 348 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF354AO60765 605 aaPredicted RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 BCAS2O75934 225 aaPredicted RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 SLITRK5O94991 958 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 SNUPNO95149 360 aaKnown RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 MYZAPP0CAP1 466 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 CREB1P16220 341 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 CNR1P21554 472 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 FEN1P39748 380 aaKnown RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 NRG3P56975 720 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 KCNK10P57789 538 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 SRSF11Q05519 484 aaKnown RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 BTKQ06187 659 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 MGAT2Q10469 447 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 KIAA0040Q15053 153 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF750Q32MQ0 723 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ARL13AQ5H913 290 aaPredicted RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 CEP85LQ5SZL2 805 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 HLA-DQA1Q5Y7H0 255 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 FAM71E1Q6IPT2 247 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 NOXRED1Q6NXP6 359 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 Q6ZPB1 254 aaPredicted RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 EXOC3L1Q86VI1 746 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 OR2M7Q8NG81 312 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ADIPOR1Q96A54 375 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 FCRL1Q96LA6 429 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 CCT7Q99832 543 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 EBPLQ9BY08 206 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 STMN4Q9H169 189 aaPredicted RBP11.8□□□□□ -0.52
CLCN3-210ENST00000515420 SH2D2AQ9NP31 389 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 SLC35C2Q9NQQ7 365 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 DEPPQ9NTK1 212 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 CNIH4Q9P003 139 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 METRNQ9UJH8 293 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ENTPD4Q9Y227 616 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 ZNF835Q9Y2P0 537 aa11.8□□□□□ -0.52
CLCN3-210ENST00000515420 HECTD1Q9ULT8 2610 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 ICE1Q9Y2F5 2266 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 NPIPA5E9PKD4 350 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 ACOT7O00154 380 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 TFECO14948 347 aaPredicted RBP11.79□□□□□ -0.52
CLCN3-210ENST00000515420 SEC22BO75396 215 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 ZWINTO95229 277 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 P04436 131 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 CHRNGP07510 517 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 IFI6P09912 130 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 DHRS4L1P0CG22 281 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 NAGAP17050 411 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 GPX3P22352 226 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 MPIP34949 423 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 CASP6P55212 293 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 DCAF7P61962 342 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 PSPHP78330 225 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 DUSP2Q05923 314 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 NTRK2Q16620 822 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 UGT3A2Q3SY77 523 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 RNFT1Q5M7Z0 435 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 SLC22A10Q63ZE4 541 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 Q6ZSR9 355 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 SLC22A16Q86VW1 577 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 KIRREL3Q8IZU9 778 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 FBXW8Q8N3Y1 598 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 TWIST2Q8WVJ9 160 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 MAGED4Q96JG8 741 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 SECISBP2Q96T21 854 aaKnown RBP11.79□□□□□ -0.52
CLCN3-210ENST00000515420 BRINP2Q9C0B6 783 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 TUBB1Q9H4B7 451 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 LRTM1Q9HBL6 345 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 MIEF1Q9NQG6 463 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 PRODH2Q9UF12 536 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 NPIPA1Q9UND3 350 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 TRAF6Q9Y4K3 522 aa11.79□□□□□ -0.52
CLCN3-210ENST00000515420 POLR3HQ9Y535 204 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms