RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 PYCARD-AS1I3L0S3 204 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 CDK2AP1O14519 115 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 NEURL1O76050 574 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 PCSK2P16519 638 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 TRHRP34981 398 aaPredicted RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 ASMTP46597 345 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 MRPS35P82673 323 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 EMX2Q04743 252 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 EXOSC7Q15024 291 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 CEBPEQ15744 281 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 IGFBP7Q16270 282 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 PIGGQ5H8A4 983 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 ZNF766Q5HY98 468 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 HORMAD2Q8N7B1 307 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 ZNF615Q8N8J6 731 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 OR7G1Q8NGA0 311 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 OR9A2Q8NGT5 310 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 NUBPLQ8TB37 319 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 DYDC1Q8WWB3 177 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 ASB15Q8WXK1 588 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 KAT2AQ92830 837 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 CTHRC1Q96CG8 243 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 SNRNP40Q96DI7 357 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 GAL3ST4Q96RP7 486 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 RASL10BQ96S79 203 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 HES7Q9BYE0 225 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 MEAF6Q9HAF1 191 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 KLHL1Q9NR64 748 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 INTS9Q9NV88 658 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 SH3BP4Q9P0V3 963 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 ZNF639Q9UID6 485 aa12.93□□□□□ -0.34
USP46-209ENST00000514536 EIF3LQ9Y262 564 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 COPG1Q9Y678 874 aaKnown RBP12.93□□□□□ -0.34
USP46-209ENST00000514536 C2orf92A0A1B0GVN3 265 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 OR6C76A6NM76 312 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 HDAC3O15379 428 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 ZNF354AO60765 605 aaPredicted RBP12.92□□□□□ -0.34
USP46-209ENST00000514536 SP1P08047 785 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 PRPS2P11908 318 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 CD46P15529 392 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 NTSP30990 170 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 NCBP2P52298 156 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP46-209ENST00000514536 MAD2L1Q13257 205 aaPredicted RBP12.92□□□□□ -0.34
USP46-209ENST00000514536 EBPQ15125 230 aaKnown RBP12.92□□□□□ -0.34
USP46-209ENST00000514536 MPEG1Q2M385 716 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 ZNF385BQ569K4 471 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 ZNF628Q5EBL2 1059 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 HLA-DQA1Q5Y7H0 255 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 SLC25A25Q6KCM7 469 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 IL20RBQ6UXL0 311 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 ZNF227Q86WZ6 799 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 FAM9CQ8IZT9 166 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 SIMC1Q8NDZ2 872 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 ZNF675Q8TD23 568 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 LRRC8CQ8TDW0 803 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 PPCDCQ96CD2 204 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 C5orf34Q96MH7 638 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 WWTR1Q9GZV5 400 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 TRIM45Q9H8W5 580 aaPredicted RBP12.92□□□□□ -0.34
USP46-209ENST00000514536 ANKRA2Q9H9E1 313 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 ERVK-11Q9UQG0 969 aa12.92□□□□□ -0.34
USP46-209ENST00000514536 A8MVJ9 347 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 SLCO1B7G3V0H7 640 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 SDHDO14521 159 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 VPS4BO75351 444 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 SLC25A12O75746 678 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 OR6B1O95007 311 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 CBX7O95931 251 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 G6PDP11413 515 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 SOX3P41225 446 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 PTGR1Q14914 329 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 MAPKAPK3Q16644 382 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 SMU1Q2TAY7 513 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 RPUSD3Q6P087 351 aaKnown RBP12.91□□□□□ -0.34
USP46-209ENST00000514536 R3HCC1LQ7Z5L2 792 aaKnown RBP12.91□□□□□ -0.34
USP46-209ENST00000514536 CYP4Z2PQ8N1L4 340 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 OR52R1Q8NGF1 315 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 C16orf52Q8NHV5 167 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 NUDT8Q8WV74 236 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 CIDECQ96AQ7 238 aaPredicted RBP12.91□□□□□ -0.34
USP46-209ENST00000514536 GLIPR2Q9H4G4 154 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 ASF1BQ9NVP2 202 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 HPF1Q9NWY4 346 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 NOP53Q9NZM5 478 aaKnown RBP12.91□□□□□ -0.34
USP46-209ENST00000514536 ATP6V1HQ9UI12 483 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 NTNG1Q9Y2I2 539 aa12.91□□□□□ -0.34
USP46-209ENST00000514536 GOLGA8QA0A0J9YX86 632 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 GOLGA8OA6NCC3 632 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 TRPC5OSA6NMA1 111 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 GOLGA8NF8WBI6 632 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 PDPK1O15530 556 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 TBX19O60806 448 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 LBPP18428 481 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 NR0B1P51843 470 aaKnown RBP12.9□□□□□ -0.34
USP46-209ENST00000514536 DIO3P55073 304 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 DUSP8Q13202 625 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 PDE7AQ13946 482 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 OPN5Q6U736 354 aa12.9□□□□□ -0.34
USP46-209ENST00000514536 LARP4Q71RC2 724 aaKnown RBP eCLIP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms