RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 CELF6Q96J87 481 aaKnown RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 DCLRE1CQ96SD1 692 aaKnown RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SLC30A2Q9BRI3 323 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SHARPINQ9H0F6 387 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 C11orf54Q9H0W9 315 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 TMEM38AQ9H6F2 299 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 RANGRFQ9HD47 186 aaPredicted RBP7.02□□□□□ -1.29
CLIP1-205ENST00000514271 ACER3Q9NUN7 267 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SPASTQ9UBP0 616 aa7.02□□□□□ -1.29
CLIP1-205ENST00000514271 SHISA3A0PJX4 238 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 NPEPPSL1A6NEC2 478 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 PRAMEF26H0Y7S4 382 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 FPGTO14772 594 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 IL1AP01583 271 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 EBLN1P0CF75 366 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 BCKDHAP12694 445 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SLC6A1P30531 599 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 CD96P40200 585 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 CTSOP43234 321 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 FNTBP49356 437 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 PTPRCAPQ14761 206 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 PRSS53Q2L4Q9 553 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 VMACQ2NL98 169 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TOR2AQ5JU69 321 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SPANXN4Q5MJ08 99 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 PSAPL1Q6NUJ1 521 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF767PQ75MW2 155 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SYT12Q8IV01 421 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 KRTCAP2Q8N6L1 136 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 OR56A4Q8NGH8 313 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 OR13C4Q8NGS5 318 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 OR4L1Q8NH43 312 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 C9orf43Q8TAL5 461 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 CXorf40AQ8TE69 158 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 EEF1AKMT1Q8WVE0 214 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 HMGB4Q8WW32 186 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 FIG4Q92562 907 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TUBGCP3Q96CW5 907 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ZHX1-C8orf76Q96EF9 292 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TMEM246Q9BRR3 403 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 YIPF4Q9BSR8 244 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 FARSBQ9NSD9 589 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TNFRSF10DQ9UBN6 386 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ENTPD4Q9Y227 616 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 KCNMB2Q9Y691 235 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 COL5A1P20908 1838 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 UBA6A0AVT1 1052 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SYCE1LA8MT33 242 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 KLF4O43474 513 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 CSO75390 466 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 FADS2O95864 444 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SDC1P18827 310 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 CD72P21854 359 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ERP29P30040 261 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TALDO1P37837 337 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TCF15Q12870 199 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 LARS2Q15031 903 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TIGD6Q17RP2 521 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 MPEG1Q2M385 716 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 PLK5Q496M5 336 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 PIP5KL1Q5T9C9 394 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 METAP1DQ6UB28 335 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ZDHHC21Q8IVQ6 265 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 GALNT12Q8IXK2 581 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 RYBPQ8N488 228 aaPredicted RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 FBXO39Q8N4B4 442 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 EIF4E3Q8N5X7 224 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ZNF454Q8N9F8 522 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 OR52H1Q8NGJ2 320 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 RPS4Y2Q8TD47 263 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 HTRA1Q92743 480 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 WDR34Q96EX3 536 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 NIPSNAP1Q9BPW8 284 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 ZDHHC6Q9H6R6 413 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 MRPL39Q9NYK5 338 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 GPRC5BQ9NZH0 403 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SLC23A1Q9UHI7 598 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 BTNL2Q9UIR0 455 aa7.01□□□□□ -1.29
CLIP1-205ENST00000514271 SAMD4AQ9UPU9 718 aaKnown RBP7.01□□□□□ -1.29
CLIP1-205ENST00000514271 TRAV6A0A075B6T7 132 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 KIAA0513O60268 411 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 LEFTY1O75610 366 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CCNKO75909 580 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 AMD1P17707 334 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 CD22P20273 847 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 RGRP47804 291 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 STK19P49842 368 aaPredicted RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 ADPRHP54922 357 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 DSTNP60981 165 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 SRP54P61011 504 aaKnown RBP7□□□□□ -1.29
CLIP1-205ENST00000514271 DPTQ07507 201 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 AGBL4Q5VU57 503 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 ARHGAP11AQ6P4F7 1023 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 QSOX2Q6ZRP7 698 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 PHACTR4Q8IZ21 702 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 TCAIMQ8N3R3 496 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 GDPD1Q8N9F7 314 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 B3GNT7Q8NFL0 401 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 OR10Z1Q8NGY1 313 aa7□□□□□ -1.29
CLIP1-205ENST00000514271 LKAAEAR1Q8TD35 194 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms