RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 RGS1Q08116 209 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 SLC13A2Q13183 592 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 SLMAPQ14BN4 828 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 EFTUD2Q15029 972 aaKnown RBP eCLIP8.26□□□□□ -1.09
NUP54-211ENST00000512151 BEX5Q5H9J7 111 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 LIPNQ5VXI9 398 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 NEPROQ6NW34 567 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 CYS1Q717R9 158 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 YRDCQ86U90 279 aaKnown RBP8.26□□□□□ -1.09
NUP54-211ENST00000512151 C9orf40Q8IXQ3 194 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 DEPDC4Q8N2C3 294 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 ANKRD53Q8N9V6 530 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 FAM13CQ8NE31 585 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 ABHD11Q8NFV4 315 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 OR4K1Q8NGD4 311 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 SGMS2Q8NHU3 365 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 ZNF721Q8TF20 911 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 CAVIN3Q969G5 261 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 ALKBH8Q96BT7 664 aaKnown RBP8.26□□□□□ -1.09
NUP54-211ENST00000512151 TRMT61AQ96FX7 289 aaKnown RBP8.26□□□□□ -1.09
NUP54-211ENST00000512151 ZNF597Q96LX8 424 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 TNFRSF13CQ96RJ3 184 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 UCN2Q96RP3 112 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 CSF3RQ99062 836 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 TSPYL1Q9H0U9 437 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 LIPT1Q9Y234 373 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 C15orf41Q9Y2V0 281 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 MED16Q9Y2X0 877 aa8.26□□□□□ -1.09
NUP54-211ENST00000512151 TRBC2A0A5B9 178 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 FAM234BA2RU67 622 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 C16orf97H3BN30 126 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 H3BQF6 201 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 HAUS5O94927 633 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 AHSGP02765 367 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 SHBGP04278 402 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 FBXO45P0C2W1 286 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 POU2F1P14859 743 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 PAMP19021 973 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 GCAP28676 217 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 GRK3P35626 688 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 HSD17B3P37058 310 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 SLC1A2P43004 574 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 SCTRP47872 440 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 BTN3A2P78410 334 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 MGAT5Q09328 741 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 NAE1Q13564 534 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 SLC29A2Q14542 456 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 KBTBD12Q3ZCT8 623 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 TOR1AIP1Q5JTV8 583 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 FAM120AOSQ5T036 256 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 NIPAL1Q6NVV3 410 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 EMBQ6PCB8 327 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 TMEM64Q6YI46 380 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 TRMT10CQ7L0Y3 403 aaKnown RBP8.25□□□□□ -1.09
NUP54-211ENST00000512151 CILP2Q8IUL8 1156 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 CNTN4Q8IWV2 1026 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 PPM1NQ8N819 430 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 C2CD4AQ8NCU7 369 aaPredicted RBP8.25□□□□□ -1.09
NUP54-211ENST00000512151 OR10H5Q8NGA6 315 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 OR5L2Q8NGL0 311 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 OR14A16Q8NHC5 309 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 RAB3IL1Q8TBN0 382 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 DOK4Q8TEW6 326 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 ATL1Q8WXF7 558 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 NEUROG1Q92886 237 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 DAZLQ92904 295 aaKnown RBP8.25□□□□□ -1.09
NUP54-211ENST00000512151 PGM2Q96G03 612 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 PLPPR2Q96GM1 343 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 OR4K3Q96R72 315 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 MCMBPQ9BTE3 642 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 ALOXE3Q9BYJ1 711 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 MED4Q9NPJ6 270 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 FBXO6Q9NRD1 293 aaPredicted RBP8.25□□□□□ -1.09
NUP54-211ENST00000512151 CNIH4Q9P003 139 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 HEY2Q9UBP5 337 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 VTI1BQ9UEU0 232 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 ZFP69BQ9UJL9 534 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 ADAMTS6Q9UKP5 1117 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 FBXO5Q9UKT4 447 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 MAPRE3Q9UPY8 281 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 CRYL1Q9Y2S2 319 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 MAGED1Q9Y5V3 778 aaPredicted RBP8.25□□□□□ -1.09
NUP54-211ENST00000512151 PSAT1Q9Y617 370 aa8.25□□□□□ -1.09
NUP54-211ENST00000512151 C17orf105B2RV13 164 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 H0Y3Z8 333 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 HRKO00198 91 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CYR61O00622 381 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 OR10H2O60403 315 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CGAP01215 116 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 MPC1LP0DKB6 136 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CPN1P15169 458 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 OGNP20774 298 aaKnown RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 KIR2DL2P43627 348 aaPredicted RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 SLC6A12P48065 614 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 CCR8P51685 355 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 RAB38P57729 211 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 ID2Q02363 134 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 LOXL1Q08397 574 aaPredicted RBP8.24□□□□□ -1.09
NUP54-211ENST00000512151 FAPQ12884 760 aa8.24□□□□□ -1.09
NUP54-211ENST00000512151 GAB1Q13480 694 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms