RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	MSRB3	Q8IXL7	192 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	FAM9C	Q8IZT9	166 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	OR1N1	Q8NGS0	311 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	ZNF675	Q8TD23	568 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	ELP4	Q96EB1	424 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	RBM18	Q96H35	190 aa	Known RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	MAGED4	Q96JG8	741 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	LPAR4	Q99677	370 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	TUBB6	Q9BUF5	446 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	CNPPD1	Q9BV87	410 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	SEMA4C	Q9C0C4	833 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	NSRP1	Q9H0G5	558 aa	Known RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	ING2	Q9H160	280 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	ZBTB20	Q9HC78	741 aa	Predicted RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	SLAMF8	Q9P0V8	285 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	C19orf25	Q9UFG5	118 aa	Predicted RBP	13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	PSME2	Q9UL46	239 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	POLH	Q9Y253	713 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	MAN2B2	Q9Y2E5	1009 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	MAST4	O15021	2626 aa		13.53	□□□□□ -0.24
MATR3-238	ENST00000512107	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	UPK1A	O00322	258 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	PEX12	O00623	359 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	PSMG1	O95456	288 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	CPSF4	O95639	269 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	PDGFA	P04085	211 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	GSN	P06396	782 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	NTS	P30990	170 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	KIR3DL1	P43629	444 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	EMD	P50402	254 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	CLNS1A	P54105	237 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	SRSF11	Q05519	484 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	RCAN2	Q14206	197 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	GALNT12	Q8IXK2	581 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	POU5F2	Q8N7G0	328 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	MORN4	Q8NDC4	146 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	B3GNT7	Q8NFL0	401 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	OR52R1	Q8NGF1	315 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	OR5AK3P	Q8NH89	298 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	OR14A16	Q8NHC5	309 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	M1AP	Q8TC57	530 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	BRIX1	Q8TDN6	353 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	THAP4	Q8WY91	577 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	EXTL1	Q92935	676 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	NACC2	Q96BF6	587 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	GIMAP5	Q96F15	307 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	OTUB1	Q96FW1	271 aa	Predicted RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	FBXL20	Q96IG2	436 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	THOC3	Q96J01	351 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	SERHL2	Q9H4I8	314 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	EPS8L2	Q9H6S3	715 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	MMP25	Q9NPA2	562 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	ARL2BP	Q9Y2Y0	163 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	CPAMD8	Q8IZJ3	1885 aa		13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	GCN1	Q92616	2671 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-238	ENST00000512107	TRBV11-1	A0A0K0K1C0	115 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	CAPN14	A8MX76	684 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	PLOD2	O00469	737 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	RNASET2	O00584	256 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	SERPINA7	P05543	415 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	ABCB1	P08183	1280 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	CCL11	P51671	97 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	MANF	P55145	182 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	CASP9	P55211	416 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	STX1B	P61266	288 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	MLC1	Q15049	377 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	TERF2	Q15554	542 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	PCSK4	Q6UW60	755 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	VWA5B2	Q8N398	1253 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	SIRT6	Q8N6T7	355 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	FDCSP	Q8NFU4	85 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	C16orf52	Q8NHV5	167 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	PSMA8	Q8TAA3	256 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	THAP3	Q8WTV1	239 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	OR5P2	Q8WZ92	322 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	GTF2H4	Q92759	462 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	SPDL1	Q96EA4	605 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	FAM120B	Q96EK7	910 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	C16orf58	Q96GQ5	468 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	CCDC115	Q96NT0	180 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	OR52E6	Q96RD3	313 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	LMF1	Q96S06	567 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	PAIP1	Q9H074	479 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	OR10A5	Q9H207	317 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	MAP10	Q9P2G4	905 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	CLCA3P	Q9Y6N3	262 aa		13.51	□□□□□ -0.25
MATR3-238	ENST00000512107	PRSS51	A0A1B0GVH4	220 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	PLOD3	O60568	738 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	CEACAM4	O75871	244 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	NADK	O95544	446 aa	Predicted RBP	13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	MPI	P34949	423 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	SOX11	P35716	441 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	RPL3	P39023	403 aa	Known RBP	13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	CBX1	P83916	185 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	EXOSC6	Q5RKV6	272 aa	Known RBP	13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	DESI1	Q6ICB0	168 aa		13.5	□□□□□ -0.25
MATR3-238	ENST00000512107	H3F3C	Q6NXT2	135 aa		13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms