RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, human

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01088-208	ENST00000511895	SPINK14	Q6IE38	97 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF770	Q6IQ21	691 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZNF774	Q6NX45	483 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	MSANTD1	Q6ZTZ1	278 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	GLRX5	Q86SX6	157 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	NHLRC2	Q8NBF2	726 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	CORO2A	Q92828	525 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	PRMT1	Q99873	361 aa	Known RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	IL1RAP	Q9NPH3	570 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	MRGBP	Q9NV56	204 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	ARMCX3	Q9UH62	379 aa	Predicted RBP	4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	PILRA	Q9UKJ1	303 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	SI	P14410	1827 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	NOTCH3	Q9UM47	2321 aa		4.55	□□□□□ -1.68
LINC01088-208	ENST00000511895	LRRK2	Q5S007	2527 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	MED23	Q9ULK4	1368 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	MROH7	Q68CQ1	1323 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	COL11A1	P12107	1806 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	CD1D	P15813	335 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	CAST	P20810	708 aa	Known RBP	4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	SRD5A2	P31213	254 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	KCNJ1	P48048	391 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	ATP4B	P51164	291 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	BFSP1	Q12934	665 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	MLF2	Q15773	248 aa	Predicted RBP	4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	RFPL4B	Q6ZWI9	263 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	TRPV1	Q8NER1	839 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	MR1	Q95460	341 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	TOMM40L	Q969M1	308 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	PSMB7	Q99436	277 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	ATG101	Q9BSB4	218 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	RPP25	Q9BUL9	199 aa	Known RBP	4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	JPT2	Q9H910	190 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	GNB4	Q9HAV0	340 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895	ACACA	Q13085	2346 aa		4.54	□□□□□ -1.68
LINC01088-208	ENST00000511895		A8MU76	341 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	SHISA9	B4DS77	424 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	LMO7DN	F2Z398	122 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	OGT	O15294	1046 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	GRAP2	O75791	330 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	PRB1	P04280	392 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	CYBA	P13498	195 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	PTGER3	P43115	390 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	EVC	P57679	992 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	RPS8	P62241	208 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	SRPX	P78539	464 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	ZFP36L1	Q07352	338 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	HIGD2B	Q4VC39	106 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	PM20D1	Q6GTS8	502 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	MCM10	Q7L590	875 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	TIPARP	Q7Z3E1	657 aa	Known RBP	4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	RPAIN	Q86UA6	219 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	KCNMB4	Q86W47	210 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	OR13C5	Q8NGS8	318 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	PHOSPHO2	Q8TCD6	241 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	CKAP2	Q8WWK9	683 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	SMPDL3A	Q92484	453 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	BPIFA2	Q96DR5	249 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	FOXN4	Q96NZ1	517 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	COA1	Q9GZY4	146 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	CTNNA3	Q9UI47	895 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	AUP1	Q9Y679	476 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	STYXL1	Q9Y6J8	313 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	ABCA2	Q9BZC7	2435 aa		4.53	□□□□□ -1.68
LINC01088-208	ENST00000511895	NF1	P21359	2839 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	CDK5RAP2	Q96SN8	1893 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	CCDC162P	A2VCL2	907 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	ARHGEF33	A8MVX0	844 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	HOXD4	P09016	255 aa	Predicted RBP	4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	KRT3	P12035	628 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	FCGR2B	P31994	310 aa	Predicted RBP	4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	FCGR2C	P31995	323 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	ABCE1	P61221	599 aa	Known RBP	4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	TEF	Q10587	303 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	ERC1	Q8IUD2	1116 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	UBALD2	Q8IYN6	164 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	OR8H3	Q8N146	312 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	ELMOD1	Q8N336	334 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	SLC43A2	Q8N370	569 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	SPEM1	Q8N4L4	309 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	AFAP1L1	Q8TED9	768 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	MRPL38	Q96DV4	380 aa	Known RBP	4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	C17orf62	Q9BQA9	187 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	IDI2	Q9BXS1	227 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	STRADB	Q9C0K7	418 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	MFSD1	Q9H3U5	465 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	CUEDC2	Q9H467	287 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	UBE2T	Q9NPD8	197 aa	Predicted RBP	4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	VPS18	Q9P253	973 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	SH3GLB1	Q9Y371	365 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	TMED7	Q9Y3B3	224 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	LOC285556	D6RIA3	1793 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	TICRR	Q7Z2Z1	1910 aa		4.52	□□□□□ -1.69
LINC01088-208	ENST00000511895	MYO10	Q9HD67	2058 aa		4.51	□□□□□ -1.69
LINC01088-208	ENST00000511895	ANKDD1B	A6NHY2	528 aa		4.51	□□□□□ -1.69
LINC01088-208	ENST00000511895	SHISA7	A6NL88	538 aa		4.51	□□□□□ -1.69
LINC01088-208	ENST00000511895	B4GAT1	O43505	415 aa		4.51	□□□□□ -1.69
LINC01088-208	ENST00000511895	GALR3	O60755	368 aa	Predicted RBP	4.51	□□□□□ -1.69
LINC01088-208	ENST00000511895	KIN	O60870	393 aa	Known RBP	4.51	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms