RNA–Protein interactions for RNA: ENST00000511767.3

PDLIM5-216, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-216ENST00000511767 EML6Q6ZMW3 1958 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 DOPEY1Q5JWR5 2465 aa14.9□□□□□ -0.02
PDLIM5-216ENST00000511767 PCNX1Q96RV3 2341 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 A0A1B0GUH1 482 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 SLC28A1O00337 649 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 RGS16O15492 202 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 CTIFO43310 598 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 RSL1D1O76021 490 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 CHRNGP07510 517 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 FBXO45P0C2W1 286 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 ARRB2P32121 409 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 PTGER1P34995 402 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 MPP2Q14168 576 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 HEPACAMQ14CZ8 416 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 CEBPEQ15744 281 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 IMPG1Q17R60 797 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 TRMT12Q53H54 448 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 SLC22A10Q63ZE4 541 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 FAM71E1Q6IPT2 247 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 NOXRED1Q6NXP6 359 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 RNF165Q6ZSG1 346 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 SPPL2CQ8IUH8 684 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 ADCY4Q8NFM4 1077 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 KLHL29Q96CT2 875 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 ZIM3Q96PE6 472 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 EBPLQ9BY08 206 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 PROK2Q9HC23 129 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 SLC35C2Q9NQQ7 365 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 DNAJC15Q9Y5T4 150 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 NINQ8N4C6 2090 aa14.89□□□□□ -0.03
PDLIM5-216ENST00000511767 SEC22BO75396 215 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 CBX7O95931 251 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 CCL3P10147 92 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 RFC3P40938 356 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 GSTM5P46439 218 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 NR0B1P51843 470 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 FOXO1Q12778 655 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 DUSP8Q13202 625 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 CEP85LQ5SZL2 805 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 KANK2Q63ZY3 851 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 TMEM64Q6YI46 380 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 BNC2Q6ZN30 1099 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 HOMEZQ8IX15 550 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 OR2M7Q8NG81 312 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 OR52N2Q8NGI0 321 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 OR2T11Q8NH01 316 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 SLC22A8Q8TCC7 542 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 PAQR8Q8TEZ7 354 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 SPACA9Q96E40 222 aaPredicted RBP14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 EGLN2Q96KS0 407 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 GAL3ST4Q96RP7 486 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 SSU72Q9NP77 194 aaKnown RBP14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 EHD3Q9NZN3 535 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 PTGDR2Q9Y5Y4 395 aa14.88□□□□□ -0.03
PDLIM5-216ENST00000511767 A0A0G2JMM0 328 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 A0A1W2PPB8 328 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 A0A1W2PRS3 328 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 KIR3DP1A8MWS1 328 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 MYO1GB0I1T2 1018 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 G3V3Y1 287 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZNHIT1O43257 154 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 HS6ST1O60243 411 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 GLSO94925 669 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 LINC00032P0C843 101 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZNF24P17028 368 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 DDCP20711 480 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 EMDP50402 254 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 RBPJQ06330 500 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 EXOSC7Q15024 291 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 RFTN2Q52LD8 501 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 C1QL3Q5VWW1 255 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 HLA-DQA1Q5Y7H0 255 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 Q6ZPB1 254 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZCCHC23Q6ZST2 131 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 FGD2Q7Z6J4 655 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 NUDCD3Q8IVD9 361 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 SAMD14Q8IZD0 417 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 TAGAPQ8N103 731 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 LRRC25Q8N386 305 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 VWA5B2Q8N398 1253 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 C17orf47Q8NEP4 570 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZNF675Q8TD23 568 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 EXOSC8Q96B26 276 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZBTB9Q96C00 473 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 FCRL1Q96LA6 429 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 FAM173AQ9BQD7 235 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 BRINP2Q9C0B6 783 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 DEFB127Q9H1M4 99 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 LRTM1Q9HBL6 345 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 EML4Q9HC35 981 aaKnown RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 MYNNQ9NPC7 610 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 SACM1LQ9NTJ5 587 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 C1orf109Q9NX04 203 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZDHHC2Q9UIJ5 367 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 POLR3HQ9Y535 204 aaPredicted RBP14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 NPFFR2Q9Y5X5 522 aa14.87□□□□□ -0.03
PDLIM5-216ENST00000511767 ZNF407Q9C0G0 2248 aa14.86□□□□□ -0.03
PDLIM5-216ENST00000511767 TRGV8A0A0C4DH27 118 aa14.86□□□□□ -0.03
PDLIM5-216ENST00000511767 TMEM233B4DJY2 109 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms