RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 RNF44Q7L0R7 432 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 ARMC8Q8IUR7 673 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 CCDC36Q8IYA8 594 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 OR7G3Q8NG95 312 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 AENQ8WTP8 325 aaKnown RBP9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 COL21A1Q96P44 957 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 SGPP1Q9BX95 441 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 ZNF160Q9HCG1 818 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 PCDHGA10Q9Y5H3 936 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 PCDHA9Q9Y5H5 950 aa9.11□□□□□ -0.95
POLR2J3-215ENST00000511313 SLC22A23A1A5C7 686 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 OR2A25A4D2G3 310 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 CCT8L1PA6NM43 557 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 SURF4O15260 269 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 GOSR1O95249 250 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TP53P04637 393 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 STT3AP46977 705 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 PTDSS1P48651 473 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 DCTN2Q13561 401 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ZNF678Q5SXM1 525 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 FRMD7Q6ZUT3 714 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 IFNEQ86WN2 208 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 P3H2Q8IVL5 708 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 METTL4Q8N3J2 472 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 L3MBTL4Q8NA19 623 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TEX47Q8TBZ9 253 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TRMT61AQ96FX7 289 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 F2RL3Q96RI0 385 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 CDCP1Q9H5V8 836 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TMPRSS11EQ9UL52 423 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 PMF1-BGLAPU3KQ54 211 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ZCWPW2A0A1B0GU75 182 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 PIP5K1BO14986 540 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ADAMDEC1O15204 470 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 DXOO77932 396 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 HMGN1P05114 100 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 GABRA3P34903 492 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 STAT5AP42229 794 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 HLCSP50747 726 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 RPS7P62081 194 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 SIX1Q15475 284 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 RBM20Q5T481 1227 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 NOXRED1Q6NXP6 359 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ZFP1Q6P2D0 407 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ASCL5Q7RTU5 278 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 CAMKMTQ7Z624 323 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 CLNKQ7Z7G1 428 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 OR13J1Q8NGT2 312 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 OR9A4Q8NGU2 314 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ZNF75CPQ92670 426 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 RND1Q92730 232 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 CDH20Q9HBT6 801 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 SAGE2PA6NJ88 616 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 AIM2O14862 343 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ACTL6AO96019 429 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 OR1D4P47884 311 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ST3GAL3Q11203 375 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TCF15Q12870 199 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 SEC23BQ15437 767 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TMEM225Q6GV28 225 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TCTN3Q6NUS6 607 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 CDC73Q6P1J9 531 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 NANOGNBQ7Z5D8 188 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 FAM47BQ8NA70 645 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 ZSCAN4Q8NAM6 433 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 MDM1Q8TC05 714 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 LRRN4Q8WUT4 740 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 TMEM120AQ9BXJ8 343 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 SAR1AQ9NR31 198 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 MARCH4Q9P2E8 410 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 KLHL9Q9P2J3 617 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 PROCRQ9UNN8 238 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 PCDHGB1Q9Y5G3 927 aa9.1□□□□□ -0.95
POLR2J3-215ENST00000511313 OXSR1O95747 527 aaPredicted RBP9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 GSNP06396 782 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 PTGS2P35354 604 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 OR2B6P58173 313 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 EIF4EBP2Q13542 120 aaPredicted RBP9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 LRRC23Q53EV4 343 aaPredicted RBP9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 C1orf146Q5VVC0 180 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 OAFQ86UD1 273 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 C10orf107Q8IVU9 208 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 PAPD5Q8NDF8 572 aaKnown RBP9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 CA5BP1Q8WTZ4 195 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 PHF10Q8WUB8 498 aaKnown RBP9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 MS4A8Q9BY19 250 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 DLGAP2Q9P1A6 1054 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 TCRBV7S2A1N4TA0A589 114 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 PVRP15151 417 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 ST6GAL1P15907 406 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 PPP3CBP16298 524 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 SESN3P58005 492 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 PPIAP62937 165 aaKnown RBP9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 SLC9B1Q4ZJI4 515 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 ZNF628Q5EBL2 1059 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 FGD3Q5JSP0 725 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 FAM209AQ5JX71 171 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 BICRALQ6AI39 1079 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 ANKRD26P1Q6NSI1 321 aa9.09□□□□□ -0.95
POLR2J3-215ENST00000511313 CLEC14AQ86T13 490 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms