RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 SPATA19Q7Z5L4 167 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 HMGN2P46Q86SG4 172 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 MTDHQ86UE4 582 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 SCUBE1Q8IWY4 988 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PRR22Q8IZ63 422 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 MIER2Q8N344 545 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR11G2Q8NGC1 345 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR4A15Q8NGL6 344 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CEP70Q8NHQ1 597 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PNPT1Q8TCS8 783 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 ACTRT2Q8TDY3 377 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 EXTL1Q92935 676 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 FKBP10Q96AY3 582 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 C11orf24Q96F05 449 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 MAELQ96JY0 434 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 GAL3ST4Q96RP7 486 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CCT7Q99832 543 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 WDR77Q9BQA1 342 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 NUDT9Q9BW91 350 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 NMUR2Q9GZQ4 415 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 NSRP1Q9H0G5 558 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 EPN3Q9H201 632 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 GLIPR2Q9H4G4 154 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 REEP4Q9H6H4 257 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 MYNNQ9NPC7 610 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ADAP2Q9NPF8 381 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SLC35C2Q9NQQ7 365 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 C14orf105Q9NVL8 296 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 EHD3Q9NZN3 535 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 LUZP4Q9P127 313 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PTGFRNQ9P2B2 879 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 KLHL14Q9P2G3 628 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 KCND3Q9UK17 655 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ADAM29Q9UKF5 820 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CES1P1Q9UKY3 287 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 MRPS33Q9Y291 106 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 CLDN16Q9Y5I7 305 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ZNF780BQ9Y6R6 833 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ATRXP46100 2492 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CNTRLQ7Z7A1 2325 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 EPG5Q9HCE0 2579 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 EML6Q6ZMW3 1958 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 IGLV3-12A0A075B6K2 115 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ELOA3CA0A087WX78 387 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 IGHV1-45A0A0A0MS14 117 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 NSG1A0A0A6YYJ2 146 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 C1orf226A1L170 272 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ELOA3DA6NLF2 546 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 K7EM74 188 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 WWP2O00308 870 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PDPK1O15530 556 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SNX3O60493 162 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 VPS4BO75351 444 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 FAM87AP0C7U9 286 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PRPS2P11908 318 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 PORP16435 677 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 CSNK2A2P19784 350 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 PRPH2P23942 346 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 MMP11P24347 488 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 NTSP30990 170 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 S100A3P33764 101 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SOX18P35713 384 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 POLR2JP52435 117 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 MANFP55145 182 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 CLDN8P56748 225 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ZNF33BQ06732 778 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 DUSP8Q13202 625 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 CAPRIN1Q14444 709 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 SSPNQ14714 243 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 HEPACAMQ14CZ8 416 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ELOA3BQ3SY89 546 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 C10orf62Q5T681 223 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 GALNT18Q6P9A2 607 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ANGPTL8Q6UXH0 198 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 QSOX2Q6ZRP7 698 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 RAB43Q86YS6 212 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 GALNT12Q8IXK2 581 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ZNF595Q8IYB9 648 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 LRRC25Q8N386 305 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 ELOA3Q8NG57 546 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR7G2Q8NG99 324 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR52R1Q8NGF1 315 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR5M3Q8NGP4 307 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 SLC2A12Q8TD20 617 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 BCAS4Q8TDM0 211 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 BRIX1Q8TDN6 353 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 PTPMT1Q8WUK0 201 aaPredicted RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 RIT1Q92963 219 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 NCLNQ969V3 563 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 C16orf58Q96GQ5 468 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 THOC3Q96J01 351 aaKnown RBP5.04□□□□□ -1.6
PROM1-211ENST00000511153 FCRL1Q96LA6 429 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR1F2PQ96R84 312 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 OR52E6Q96RD3 313 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 LMF1Q96S06 567 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 ZBTB18Q99592 522 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 NPAS2Q99743 824 aa5.04□□□□□ -1.6
PROM1-211ENST00000511153 DPH2Q9BQC3 489 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms